Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2869 |
Symbol | |
ID | 6410538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 3130854 |
End bp | 3133595 |
Gene Length | 2742 bp |
Protein Length | 913 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642712749 |
Product | DNA gyrase subunit A |
Protein accession | YP_001991852 |
Protein GI | 192291247 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.135991 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTCCGACA AAGACGACGA GAAGCCCGAG GGGCCGCAGG CGCCCTCGGA TATTCGCCCC GTATCCATTC TCGACGAGAT GAAGCGCAGC TATCTCGATT ACGCGATGAG CGTGATCGTG GCGCGAGCGC TGCCGGATGC GCGCGACGGG TTGAAGCCGG TGCATCGCCG TATCCTCTAC GGCATGTACG AGAACGGCTT CGAGTGGAAC AAGCAGTATC GCAAGTCGGC GCGCACCGTC GGCGACGTCA TCGGTAAGTA TCACCCACAC GGCGACCAGT CGGTGTACGA CGCGCTGGTC CGTATGGCGC AAGACTTCTC GATGCGCGTG CCGCTGATCG ACGGTCAGGG CAATTTCGGT TCGGTCGACG GCGATATGCC GGCGGCGATG CGGTACACCG AATCTCGCCT GACCAAGATC GCGCAGACGC TGCTCGACGA TATCGACAAG GACACCGTCG ACTTCCAGCC GAACTACGAC AATTCGGAAA GGGAGCCGCA GGTCCTTCCT GCCAAGTTCC CGAACCTCTT GGTCAACGGC GCCGGCGGCA TCGCGGTCGG CATGGCCACC AATATTCCGC CGCACAATCT CGGCGAGGTG ATCGACGCCT GTATCGCGCT GATCGACGAT CCGGCGCTGT CGATCGACGA TCTCAACAAG ATCGTGCCGG GTCCTGACTT CCCGACCGGC GGCATCATCC TCGGCCGCGC CGGCATCCGC GCCGCGTATC AGACCGGCCG CGGTTCGATC GTGATGCGTG GCAAGGTCGA GATCGAGACC GTCCGCAAGG ACCGCGAGGC GATTATCGTC TCGGAGATCC CGTACCAGGT GAACAAGGCC ACCATGGTCG AGCGCATCGC CGAACTGGTG CGCGAGAAGA AGATCGAAGG CATCGGCGAC CTGCGCGACG AATCCGACCG CGACGGATTC CGCGTGGTCA TCGAGCTGCG CCGCGACGCC GTGCCTGAAG TGGTGCTCAA TCAGCTCTAT AAGTTTACGC CGCTGCAGAC GAATTTCGGC GCCAACATGG TGGCGCTGGA AGGCGGCCGG CCGCAGCTGA TGAACCTGAA GGATCTGCTG ACGGTCTTCG TCGCGTTCCG CGAACAGGTC GTCACCCGCC GCACCAAATT CCTGCTCAAC AAGGCCCGCG ATCGCGCCCA CATCTTGGTC GGCCTCGCGA TTGCGGTGGC GAATATCGAC GAGATCATTC GTGTGATCCG TAATTCGCCC GATCCGAACA CGGCCCGTGA GACCCTGATG TCGCGCGACT GGCCGGCGGC GGATGTCGCG GCGATGATCA CGCTGATCGA CGATCCGCGC CACAAGCTCA ATCCCGACGG CACTGCGCGG CTGTCGTTCG AACAGGCGAA AGCGATTCTC GATCTGCGGC TGCAGCGCCT CACCGCGCTG GGACGCGAAG AGATATCCGA AGAGCTCGAC AAGCTCGCGG TCGAAATCGC CGACTATCTG GAAATCCTGC GCTCGCGGGC GCGGGTGCAG GCGATCGTCA AGACCGAGCT CGGCGAGGTC AAGGCCGAGT TCGCAACGCC GCGCCGGACC GTGATCGCCG AGCAGGAAGG CGAGGTCGAA GACGAAGACC TGATCCAGCG CGAGGACATG GTGGTGACCG TGTCGCACGC CGGCTACGTC AAACGGGTGC CGCTGTCGAC CTATCGGGCG CAGCGCCGCG GCGGCAAGGG CCGCTCCGGC ATGGCGACGC GCGAGGAGGA TTTCGTCTCG CGGCTGTTCG TTGCCTCGAC GCACACGCCG GTGCTGTTCT TCTCGTCGCG CGGCCAGGTC TACAAGGAGA AGGTCTGGCG GTTGCCGCTG GCGCCACCGA ACGGCCGCGG CAAGGCGCTG ATCAACATCC TGCCGCTGGA GCAGGGTGAG CGCATCACCA CGATCATGCC GCTGCCGGAG GACGAAGCCT CGTGGAGCGA GCTCGACGTG ATGTTCGCCA CCACCGGCGG CAACGTCCGC CGCAACAAGC TGTCCGACTT CGTCGATGTC CGCCGCTCCG GCATCATCGC GATGAAGCTC GATGAGGGCG AGGCGATCGT CGACGTGCAG ATCTGCACCG AGCGCGACGA CGTGCTGCTG ACCGCCGCTG GCGGACAGTG CATCCGCTTC CCGGTGCCGG ACGTGCGCGT ATTCAGCGGC CGCACCTCGA TGGGCGTGCG GGGCATCGCG CTGTCGTCGG GCGACACGGT GATCTCGCTC AGCATCCTGC GCCATTTCGA AGCGACGCCT GCCGAACGCT CGACCTATCT CAAGCAGTCC GGCGCGATCC GCCGTGCCGC GACCGGTGAG GAGAACGAGC CGGTCGAGAC GCCGGAGGCC GAAGCCGAGG AGGGCGATGC GTCCGCGGCG CTGTCGCAGG AGCGTTACGC CGAGATGTCG GCGTCTGAGC AATTCGTGCT GACGATCTCG GAGAACGGCT ACGGCAAACG GACCTCGTCG TTCGAGTACC GCACCACCGG GCGCGGCGGC AAAGGCATCG TGGCGATGTC GGTGAACAGC CGAAACGGCA AGCTGGTGGC GTCGTTCCCG GTCGAGGATT CCGACCAGAT CATGCTGGTG ACGGACAACG GCCAGTTGAT CCGCTGCCCG GTCGAAGGCA TCCGCGTCGC CGGCCGCTCG ACGCAAGGCG TGATCGTGTT CAACACCGCG GATGACGAGA AGGTGGTCTC GGTCGAGCGC ATCCCGGAGA CCGACGACGG CGAGAACGGC AACGGCGGCT AG
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Protein sequence | MSDKDDEKPE GPQAPSDIRP VSILDEMKRS YLDYAMSVIV ARALPDARDG LKPVHRRILY GMYENGFEWN KQYRKSARTV GDVIGKYHPH GDQSVYDALV RMAQDFSMRV PLIDGQGNFG SVDGDMPAAM RYTESRLTKI AQTLLDDIDK DTVDFQPNYD NSEREPQVLP AKFPNLLVNG AGGIAVGMAT NIPPHNLGEV IDACIALIDD PALSIDDLNK IVPGPDFPTG GIILGRAGIR AAYQTGRGSI VMRGKVEIET VRKDREAIIV SEIPYQVNKA TMVERIAELV REKKIEGIGD LRDESDRDGF RVVIELRRDA VPEVVLNQLY KFTPLQTNFG ANMVALEGGR PQLMNLKDLL TVFVAFREQV VTRRTKFLLN KARDRAHILV GLAIAVANID EIIRVIRNSP DPNTARETLM SRDWPAADVA AMITLIDDPR HKLNPDGTAR LSFEQAKAIL DLRLQRLTAL GREEISEELD KLAVEIADYL EILRSRARVQ AIVKTELGEV KAEFATPRRT VIAEQEGEVE DEDLIQREDM VVTVSHAGYV KRVPLSTYRA QRRGGKGRSG MATREEDFVS RLFVASTHTP VLFFSSRGQV YKEKVWRLPL APPNGRGKAL INILPLEQGE RITTIMPLPE DEASWSELDV MFATTGGNVR RNKLSDFVDV RRSGIIAMKL DEGEAIVDVQ ICTERDDVLL TAAGGQCIRF PVPDVRVFSG RTSMGVRGIA LSSGDTVISL SILRHFEATP AERSTYLKQS GAIRRAATGE ENEPVETPEA EAEEGDASAA LSQERYAEMS ASEQFVLTIS ENGYGKRTSS FEYRTTGRGG KGIVAMSVNS RNGKLVASFP VEDSDQIMLV TDNGQLIRCP VEGIRVAGRS TQGVIVFNTA DDEKVVSVER IPETDDGENG NGG
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