Gene Rpal_2862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2862 
Symbol 
ID6410531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp3121485 
End bp3122657 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content65% 
IMG OID642712742 
Productsignal transduction histidine kinase, nitrogen specific, NtrB 
Protein accessionYP_001991845 
Protein GI192291240 
COG category[T] Signal transduction mechanisms 
COG ID[COG3852] Signal transduction histidine kinase, nitrogen specific 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGCCA TTGTCGAACC GCGCCGGGCT CAGCCGACCG ACAGCGATGC GATCCTCAAT 
GCGTTGCCGA ATCCTGTGCT GCTGGTCGGT CCCGACGGCA AAATCGTGGA CGCCAACATG
GCGGCGGAAT CATTTTTTGA GATTTCGACG CAATTGCTGC GACGGCAGTC GCTGACCGAC
CTGGTGCCGT TCGGCAGCCC GCTGCTGGCG CTGATCGAGC AGGTGCGCGT CGGGCATTCG
CCGGTCAATG AATACAAGGT CGATCTCGGC ACGCCGCGGA TCGGCGCCGA CCGCCAGGTC
GATCTGCACG TCGCGCCGCT CAACGAACGG CCCGGCCATA TCGTGGTGAT GCTGCAGGAG
CGCACCATCG CCGATAAGAT GGACCGCCAG CTCACGCATC GCAGCGCGGC GCGCTCGGTG
ATCGCGCTCG CCGCCATGCT GGCGCACGAG ATCAAGAATC CGCTGTCCGG CATCCGCGGC
GCGGCGCAAC TGCTGGAGCA GCAGGCCTCC GCCGAAGACC GGATGCTGAC CCGGCTGATC
TGCGACGAAG CCGACCGCAT CGTCACGCTG GTCGACCGCA TGGAAGTGTT CGGCGACGAC
CGCCCGGTGG CGCGCGGCCC GGTGAACATC CACTCGGTGC TGGATCACGT GAAGCGGCTG
GCGCAGTCGG GCTTTGCCCG CAACATCAAG TTCATCGAGG ACTACGACCC GTCGCTGCCG
CCGGTGCTCG CCAATCAGGA TCAGCTGATC CAAGTGTTCC TCAATCTGGT GAAGAACGCT
GCCGAGGCTG TGGTCGATCT CGGCTCCGAT GGCGAGATCC AACTCACCAC CGCGTTCCGC
CCCGGCGTCC GGCTGTCGGT GCCGGGCAAG AAGACGCGGG TGTCGCTGCC GCTGGAATTC
TGCGTGCGGG ACAACGGTCC CGGCGTTCCC GAAGATCTGC TGCCGAACCT GTTCGATCCG
TTCGTCACCA CCAAGCCGTC CGGCTCCGGC CTCGGTCTTG CATTGGTGGC GAAGATTGTC
GGCGATCACG GCGGCATCAT CGAGTGTGAA TCGCAGCCGC GCAAAACCAC TTTCCGGGTG
CTGATGCCAA TGTTCAACAC CGCCAAGGCC CTTCAATCCC CGAACGGCGA GGACGCGCCG
GCGTCGTCCG ATGCCTCACA GACTGCAAGA TGA
 
Protein sequence
MNAIVEPRRA QPTDSDAILN ALPNPVLLVG PDGKIVDANM AAESFFEIST QLLRRQSLTD 
LVPFGSPLLA LIEQVRVGHS PVNEYKVDLG TPRIGADRQV DLHVAPLNER PGHIVVMLQE
RTIADKMDRQ LTHRSAARSV IALAAMLAHE IKNPLSGIRG AAQLLEQQAS AEDRMLTRLI
CDEADRIVTL VDRMEVFGDD RPVARGPVNI HSVLDHVKRL AQSGFARNIK FIEDYDPSLP
PVLANQDQLI QVFLNLVKNA AEAVVDLGSD GEIQLTTAFR PGVRLSVPGK KTRVSLPLEF
CVRDNGPGVP EDLLPNLFDP FVTTKPSGSG LGLALVAKIV GDHGGIIECE SQPRKTTFRV
LMPMFNTAKA LQSPNGEDAP ASSDASQTAR