Gene Rpal_2794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2794 
Symbol 
ID6410458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp3038165 
End bp3039256 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content66% 
IMG OID642712670 
Productlysine 2,3-aminomutase YodO family protein 
Protein accessionYP_001991778 
Protein GI192291173 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1509] Lysine 2,3-aminomutase 
TIGRFAM ID[TIGR00238] KamA family protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.102124 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAAGG TCACCCGATT GAATACGCCG GCCGCGGCGA CGTTGCGTCA ACCCGACGAA 
CTGATCGCCG AGGGGCTGGC CGCGGCGGAC GACCGCGCGA TGCTGAGCGA GGTCGCGGCA 
CGCTACGCGA TCGCGGTGAC GCCGGCGGTT GCGGCGCTGA TCGATCGAGC TGATCCTGAC 
GATCCGATCG CGCGGCAATA CATCCCGCGC GCCGAAGAGT TGTCGTCGCT CGCCTTTGAA 
CGCGACGATC CGATCGGCGA TGCCGCGCAC GCGCCGGTCG AAGGCATCGT GCATCGTCAC 
CGCGATCGCG TGCTGTTCAA GCCGGTGCAT GTCTGCGCGG TGTATTGCCG GTTCTGCTTC 
CGCCGCGAGA TGGTCGGCCC CGGCAAGGAC AACGCGCTGT CGCGCGAAGC GACCGCTGCG 
GCGCTCGACT ACATCCGCGC GCACGACGAG ATCTGGGAAG TGATCTTCAC CGGCGGCGAT 
CCGCTGATGT TGTCACCGCG GCGGCTCAGC GAGATCATGG CCGAACTCGC CGCGATCGAG 
CACGTCAAGA TCGTTCGCTT TCACACCCGT CTTCCGGTGG CCGATCCGGC GCGGATCACG 
CCGGATTTGG TGCGCGCGCT GCGGGCGCCG GGCAAGACCA CATGGCTGGC GCTGCACGCC 
AACCACCCGC GCGAATTGAC CGAGGCTGCG CGTGCGGCGT GCGCGCGGAT CATCGACGCA 
GGGATTCCGA TGGTCAGCCA GTCGGTGTTG CTGCGCGGCG TCAACGATGA TGCGGCGACG 
CTGGAGGCGC TGATGCGCGC CTTCGTCGAA TGCCGGATCA AGCCGTATTA TCTGCATCAT 
GGCGATCTGG CGCCGGGCAC CGCGCATTTG CGCACCACGC TCGCCGAAGG TCAGGCCTTG 
ATGCGCGCGC TGCGCGGCAA TGTGTCGGGA CTCTGCCAGC CGGAGTATGT GCTCGACATT 
CCCGGCGGCT ACGGCAAGGC GCCGGTTGGC CCCAATTATT TGTCGGACGC CGATGGAACC 
GGGGCGGATT CGCGCTATCG TGTCGCCGAC TATTGCGGCG AGGTGCATCT GTATCCGCCG 
CAATCGGAAT GA
 
Protein sequence
MTKVTRLNTP AAATLRQPDE LIAEGLAAAD DRAMLSEVAA RYAIAVTPAV AALIDRADPD 
DPIARQYIPR AEELSSLAFE RDDPIGDAAH APVEGIVHRH RDRVLFKPVH VCAVYCRFCF 
RREMVGPGKD NALSREATAA ALDYIRAHDE IWEVIFTGGD PLMLSPRRLS EIMAELAAIE 
HVKIVRFHTR LPVADPARIT PDLVRALRAP GKTTWLALHA NHPRELTEAA RAACARIIDA 
GIPMVSQSVL LRGVNDDAAT LEALMRAFVE CRIKPYYLHH GDLAPGTAHL RTTLAEGQAL 
MRALRGNVSG LCQPEYVLDI PGGYGKAPVG PNYLSDADGT GADSRYRVAD YCGEVHLYPP 
QSE