| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2779 |
|---|
| Symbol | |
|---|
| ID | 6410443 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | + |
|---|
| Start bp | 3021244 |
|---|
| End bp | 3022521 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642712655 |
|---|
| Product | Amidase |
|---|
| Protein accession | YP_001991763 |
|---|
| Protein GI | 192291158 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTATC CGTTGGGACT GCTTGCAGTC CATCGCGCGT TCCGTGACGG AACGTTGAGT
CCCGCCGACT ACATTGCCAG TTGCACGCAG CGCGCCGACG AGGTCGAGCC TTGGCTGAAG
GCGTTCTGTG ATCGGCTGCC AGGAGAACAG CTCACGGGCG GTGAGGGACC GCTCGCCGGC
ATCCCGATCG GCATCAAGGA CATCATCGCC ACCGCCGGCA TCCGGACGAC CAACGGATCG
CGGGTCTATA CCGATCACGT CCCGGATCAG GACGCACCGA TCGTCGCGCG CATCAAACAG
CTCGGCGGCA TCGTGTTCGG CAAAACGGTG AGCACCGAAT TCGCCTGGCG ATGCCCTGGG
CCCACGGTCA ATCCCAACAA TCCGCAGCAC ACGCCCGGCG GCTCGTCGAG CGGGTCGGCC
GCCGCGGTGG CGGCCGGTAT CGTGCCGATG GCGCTCGGCA CCCAGACGGT CGGTTCAGTG
GTGCGTCCCG CTGCCTATTG CGGCGTCGTC GGCTTCAAGC CGAGCTTCGG CGCGATTGTG
CGCGACGGCG TTCACCCATT GGCGCAATCG CTCGATCACG TCGGATTTTT GACGCGGTCG
GTGGAGGACG CGGCGTTCGC ATTCGGCCTC CTGGCGGACG GGGCCGACGC CGGGGCGGCA
GCCCAAGCCG TCGCAGGCGA CGTACTTCCT GTCGTTTCGT CACTACGGCT CGGTGTGGTT
CGCCCGCCGA TCTGGGATCG GGTCAGTGCC GAGCAGAACC AGGCGTTCGA GACTGCGCTG
GAGACGTTAC GGCGCGGGGG CGCCACGATC GTGCCGCTGG AGCTTCCCGA GCGCTATTGG
AAGGGCTTCG AAGTCGCGGA GATCATTCTG GCAGCAGAAG CGGCCGCGAT CTTCAATGGG
CTGGTGACGC AACACCCCGA TTTGACCAGC CCGCAGCTCA AGGAACTGGT GGCGGCCGGC
AACGCGATCA GCGCGCCGCG CTACATCGAA GCCCGGCAGT TGCAGGCCTC GCTGCAGCAG
GAGTTTCCGC AGCATGTCAG CGGTCTCGAC GGCATCCTCA CGGTGCCGGC GCCCGGCGAG
GCGCCGGAAG GATTGGCCTA TACCGGAGAC GCCAGCTTCT GCGCGCTGTG GACCATGCTG
GGCGTGCCGG CCCTGACGAT GCCGATCGCC CGGTCGGCAC GCGGCCTGCC GCTCGGCCTG
CAGGTGATCG GCGGATTTGG CGAGGACGCC AAGCTGCTGC GCACCGCGCG GGTGGTCGAG
GCGGCGCTGG CGAACTAA
|
|---|
| Protein sequence | MSYPLGLLAV HRAFRDGTLS PADYIASCTQ RADEVEPWLK AFCDRLPGEQ LTGGEGPLAG
IPIGIKDIIA TAGIRTTNGS RVYTDHVPDQ DAPIVARIKQ LGGIVFGKTV STEFAWRCPG
PTVNPNNPQH TPGGSSSGSA AAVAAGIVPM ALGTQTVGSV VRPAAYCGVV GFKPSFGAIV
RDGVHPLAQS LDHVGFLTRS VEDAAFAFGL LADGADAGAA AQAVAGDVLP VVSSLRLGVV
RPPIWDRVSA EQNQAFETAL ETLRRGGATI VPLELPERYW KGFEVAEIIL AAEAAAIFNG
LVTQHPDLTS PQLKELVAAG NAISAPRYIE ARQLQASLQQ EFPQHVSGLD GILTVPAPGE
APEGLAYTGD ASFCALWTML GVPALTMPIA RSARGLPLGL QVIGGFGEDA KLLRTARVVE
AALAN
|
|---|
| |