Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2778 |
Symbol | |
ID | 6410442 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 3020196 |
End bp | 3021173 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642712654 |
Product | NMT1/THI5 like domain protein |
Protein accession | YP_001991762 |
Protein GI | 192291157 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTTCGA TCGGAAGACT CGTCGGTGCA GCCACCCTCG TGGCCTCGTT AGCGGTGTCG ACGGCGGTTC CCACCGCTGC GATGGCGAAG CAGGTGAAGA TCTCTCAAGC CTTCCAGTCC ATGCTCTACC TGCCGTTCTA CGTCGCGCTG GATAAGGGCT TCTTCAAGCA GCAGGGCCTC GACGTCGATA AGGAGACCGC CGGTTCGCCG ACCACCGCGT TGTCCGCTGT TTTGTCCGGC AGTGCGGCGT TCTCGATCCA CGGTCCGGAG TGGACCGCGA TCGCCAATTC GAAGGGCGCC GATGTCGGCA TCATCTGCAA CGTCGTGAAC GGCGCCGCGG TGTGGGTCGC TACGACGCCG GACTTCAAGT ACGACACGCT TCAGGACCTG AAGGGGCAGA AGGTTGTCGC AGGCCTGATG CCGACCACCA GCACGTCGTT GTTCATGAAG CTGCTGAAGG ACAACGGCTT GAAGCCGGAC TCTGACGTCG ATCTGCTGCA GGTGCAGATC GGCTCCGAGC CGGGCCCGTT CCTCGGCGGA CAGGCCAAGG TGGCGGTGCT GTACGAGCCC GGCCTGGATC AGGTGGTGGC GAAGGGCATG AAGGTGGCGA TCGGCTTCCC GAAGGCTTAC GGTCCGTACG CGTTCTCGTC GATCACCGCG CGGAAGAACG TCGATCCGAA GGACGCGCAG GCGGTCGTCA ACGCGATGGA GCTGGCGCTG CGCTTCATGA AGAACAACCC GGATGAAGCG GTCTCGATCG CCCAGAAGGA GTTCCCGACT CTTGATCCGA AGATCGTCGA GGCGGCGGTG CGGCGGATGA TCGCCGAGAA CGTCTATCCG AGCAGCGTAC AGACGACGCA GCAGGCCTAT GAGACCGCGA TGCAGACACA GATCGCGCTC GGCAATCTGA AGCAGGCGCC GAAGTACGAG GATTTCGTCA TCCAGGACTA CGTCAAGCCG GCGCTCGCAC TGAAGTAA
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Protein sequence | MRSIGRLVGA ATLVASLAVS TAVPTAAMAK QVKISQAFQS MLYLPFYVAL DKGFFKQQGL DVDKETAGSP TTALSAVLSG SAAFSIHGPE WTAIANSKGA DVGIICNVVN GAAVWVATTP DFKYDTLQDL KGQKVVAGLM PTTSTSLFMK LLKDNGLKPD SDVDLLQVQI GSEPGPFLGG QAKVAVLYEP GLDQVVAKGM KVAIGFPKAY GPYAFSSITA RKNVDPKDAQ AVVNAMELAL RFMKNNPDEA VSIAQKEFPT LDPKIVEAAV RRMIAENVYP SSVQTTQQAY ETAMQTQIAL GNLKQAPKYE DFVIQDYVKP ALALK
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