| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2754 |
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| Symbol | |
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| ID | 6410418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 2995318 |
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| End bp | 2996385 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642712630 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001991738 |
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| Protein GI | 192291133 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0798314 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCCGCGC TGCAGGACGA CCATGACCGC ACCATGGCCT ATGCCGAGGT GGCCCTCTCC
CAGATCAAGA CCCTCCGCCA AGGCGCCGTG CCGCGCAATT ACGAGATCTG GTACGTCTAC
GCCACCGGCC ATAATCCCGA GCTGAACAAG GCGATCAACG ACACGCTGGC GGAGCGCGGC
AACCTCACCG ACGCCGACCT CGATCAGTTG CACGATACCT ACCTCACGCA AGGCCGCACC
ACCGACCGGA TCGACCGGAT CGGCGCCCGC GTCGCCAACG AGATCGACGA CATCATGGCG
CTGCTCGCCG AGACGCTCGG CAACACCGCC AGCTTCGGCG ACGATCTGCG CGGCGAAAGC
CAGAAGCTGT CGCTGGCGAC CGACCACGAT CAGATCAAAG CGATCGTCGA GCGTCTGGTC
GTGACCACCC GCGAGATGCA GCAGGCCAAC AGCGCGCTCG AAGAGCGGCT GTCGACCTCC
AAGCAGGAGA TCGCCAATCT CCAGGTCAGC CTCGATGCGA TCCGCGCCGA GAGCCTCACC
GATCCCCTCA CCGGCCTCGG CAACCGCAAG CATTTCGACC GCACCGTCCA GGAGGCGATC
CGCAACGCCG GCGCCAGCCA GCAGCCACTG TCGCTGCTGA TGATGGACAT CGATCACTTC
AAGTCATTCA ACGACACCTA CGGCCATCTC ACCGGCGACC AGGTGCTGCG GCTCGTCGGC
ATGACGCTGA AGCAGAGCAT CAAGGGCCAG GACTTCACCG CCCGCTACGG CGGCGAGGAA
TTCGCCGTGG TGCTGCCGAA CACGCCGATG CGCCAGGCGA TCATCGTCGC CGACAACATC
CGCCGGCTGG TGATGTCGAA GGAGCTGAAG AAGAAGTCGA CCGGCGAGAT CCTCGGCCGG
GTGACGCTAT CGGCCGGCGT GTCGACGCTG AAGCCGAATG ACGATGCCGA AGCGCTGATC
GAGCGCGCCG ACGCCTGCCT CTATGCCGCC AAACGCAACG GCCGCAACCG GGTGATCTGC
GAGACAGATC CGGAATTTGC CGGCATCACG CAGGCCGCCG TTGCCTGA
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| Protein sequence | MAALQDDHDR TMAYAEVALS QIKTLRQGAV PRNYEIWYVY ATGHNPELNK AINDTLAERG
NLTDADLDQL HDTYLTQGRT TDRIDRIGAR VANEIDDIMA LLAETLGNTA SFGDDLRGES
QKLSLATDHD QIKAIVERLV VTTREMQQAN SALEERLSTS KQEIANLQVS LDAIRAESLT
DPLTGLGNRK HFDRTVQEAI RNAGASQQPL SLLMMDIDHF KSFNDTYGHL TGDQVLRLVG
MTLKQSIKGQ DFTARYGGEE FAVVLPNTPM RQAIIVADNI RRLVMSKELK KKSTGEILGR
VTLSAGVSTL KPNDDAEALI ERADACLYAA KRNGRNRVIC ETDPEFAGIT QAAVA
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