Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2721 |
Symbol | |
ID | 6410385 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 2952256 |
End bp | 2952885 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642712597 |
Product | Peroxidase |
Protein accession | YP_001991705 |
Protein GI | 192291100 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0450] Peroxiredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCCTTC ATATCGGCGA CATTGCCCCC GACTTCACCG CCGACACCAC CAAGGGCAAG ATTTCGTTCC ACGACTTCAT CGGCAACTCC TGGGTCTTCT TCTTCAGCCA TCCGGCCGAC TTCACCCCGG TCTGCACCAC CGAGATGGGC AAGACCGCCA AGCTGGCTCA GCCGTTCGCA TCTCGGAACG TCAAGCCGAT CGGCCTGTCG ACCGACACCG TGGATGAGCA CCTGAAGTGG ATCGCGGACG TCAACGATAC CCAGCAGACC GACCTGCAAT TCCCGATCAT CGCCGATCCG GAGCTGAAGG TCGCCAAGCT GTACGACATG ATCCATCCGA ACCAGAGCGA TACCGCCGCG GTGCGTTCGG TGTTCATCAT CGATCCGAAC AAGAAGATCC GCCTCACCAT GACCTACCCG ATGAATGTCG GGCGGAACTT CGACGAGATC CTGCGCGTGA TCGATGCGCT GCAGTTCGCC GACAAGCACA CCGTCGCGGC CCCGGCCGAC TGGCGCCCGG GCGACAAGGT CATCATCCCG CTGTCGGTCA AAGGCGAAGC CGCCACCAAG GCGTTCCCGC AGGGCTGGGA AGAACCCCGC CCCTATCTGC GCCTGACCAC CATCAAGTAA
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Protein sequence | MSLHIGDIAP DFTADTTKGK ISFHDFIGNS WVFFFSHPAD FTPVCTTEMG KTAKLAQPFA SRNVKPIGLS TDTVDEHLKW IADVNDTQQT DLQFPIIADP ELKVAKLYDM IHPNQSDTAA VRSVFIIDPN KKIRLTMTYP MNVGRNFDEI LRVIDALQFA DKHTVAAPAD WRPGDKVIIP LSVKGEAATK AFPQGWEEPR PYLRLTTIK
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