| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2701 |
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| Symbol | |
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| ID | 6410365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2932569 |
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| End bp | 2933507 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642712577 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_001991685 |
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| Protein GI | 192291080 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0248694 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGGCG TGCTGATCTA TCCGGACTTC CAATTGCTCG ACGCCGCAGG GCCGATCGCG
GCATTCGAGA TTGCCGCGCG CTACGCGAAG GTGGCGCCTG CCATCAAAGT GATGGCGGCA
GAGGCCGGAA CGGTGCGTAG TTCGTCAGGC GCCGAGCTGC TGGCGCGCGG CCTGCGCCAC
GATCGGGCGA TGCGGACGCT GATCGTCGCT GGCGGTGAAG GTGTTCGCGC GGCGGCGCAG
TGCGCGCGGA CGCAGGCCTT TCTGAAAGCC GCCGCGAAGC GCGGCTGCCG CATCGCCAGC
GTCTGCTCCG GCGCCTATGT GCTGGCCGAA GCCGGACTGC TCGACGGCAG GCGCGCCACC
ACGCATTGGG GCCGCAGCCG CGACTTCCGC ATGCGATATC CGCAAGTCCG GTTGGAGCCG
GATCGGATCT TCGTGCGCGA CGGCGAGGTG TGGACGTCGG CCGGCATCAG CGCCGGCATC
GATCTGGCGC TGGCGATCAT CGCCGAGGAT TATTCCGATG CGATCGCCCG TGACGTCGCG
CGGCAGTTGG TGGTCGCGCA GCGACGCGCC GGCGGTCAGT CGCAATTCTC CTCACTGGTC
GAGCTGCAGG CGCCGTCCGG GCGTTTCGCT GCGCTTTTGT CGTGGATGCG CGAACATTTG
GGCACGCCGC TCACCGTCGA GCAATTGGCC GAGCAGGCGG GGATGAGCAC GCGGCATTTC
GCTCGCGCGT TCCGCGATGA AACCGGCACC ACGCCGTCGA AGGCGGTTGA GCGGCTGCGA
CTCGAAGTGG CGCGCAGCCG GGTGCAGGCT TCAGGCGAAG CGATCGAGCT GGTCGCACAG
GCCACCGGCT TCGGCGATCC GGAGCGGATG CGCCGCGCCT TCATCCGCGC CTTCGGTCAC
CCGCCGCAAG CGCTGCGCCG CGCCGCGAAG GCCGCGTGA
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| Protein sequence | MIGVLIYPDF QLLDAAGPIA AFEIAARYAK VAPAIKVMAA EAGTVRSSSG AELLARGLRH
DRAMRTLIVA GGEGVRAAAQ CARTQAFLKA AAKRGCRIAS VCSGAYVLAE AGLLDGRRAT
THWGRSRDFR MRYPQVRLEP DRIFVRDGEV WTSAGISAGI DLALAIIAED YSDAIARDVA
RQLVVAQRRA GGQSQFSSLV ELQAPSGRFA ALLSWMREHL GTPLTVEQLA EQAGMSTRHF
ARAFRDETGT TPSKAVERLR LEVARSRVQA SGEAIELVAQ ATGFGDPERM RRAFIRAFGH
PPQALRRAAK AA
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