Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2669 |
Symbol | |
ID | 6410332 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 2898652 |
End bp | 2900391 |
Gene Length | 1740 bp |
Protein Length | 579 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642712545 |
Product | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase |
Protein accession | YP_001991654 |
Protein GI | 192291049 |
COG category | [R] General function prediction only |
COG ID | [COG0388] Predicted amidohydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.538211 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGCAAC TGCTGAAGGT CGCTACCGTC CAGTTCGAGC CGATCATGGC CGAGAAGGAG CGCAACGTCG CGCGTCTGCT CGAGCTGTGC GAGGAGGCGG CGGTGGGAGG CGCCAAACTG ATCGTCACCC CGGAGATGGG CACCACCGGC TATTGCTGGT ACGACCGCGC CGAAGTGGCG CCGTTCGTCG AGCCGATCCC GGGGCCGACC ACAGCACGGT TTGCCGCGCT GGCGCGCAAG CACGATTGCT ACATCGTCGT CGGCCTTCCG GAGGTCGATG AGGACGGCAT CTATTACAAT TCGGCCGTCC TGATCGGCCC GGAGGGATTG ATCGGGCGTC ACCGCAAGAC GCATCCGTAT ATCTCTGAGC CGAAATGGTC GGCGGCGGGC GATCTGCACA ATCAGGTGTT TGACACGCCG ATCGGGCGGA TCGCGCTGCT GATCTGCATG GACATCCATT TCGTCGAGAC TGCCCGGTTG ATGGCCCTCG GTGGCGCCGA CATCATCTGT CACATCTCGA ACTGGCTGGC GGAGCGTACC CCGGCGCCGT ACTGGATCAG CCGGGCGTTC GAGAACTCCT GCTACGTCAT CGAGAGCAAC CGCTGGGGGC TTGAGCGGAC CGTGCAGTTC TCCGGCGGAA GCTGCGTGAT CGCGCCGGAC GGCGGCATCG CTGCGGTGAT CGATGGCGGC GACGGTGTGG CCTTCGCCGA AATCGATCTG GACACTGCGC GCGCGCGCCA GATCGGCGGC GAGGCGGTGT TTCGGCAGCG GCGGCCGGAG CTGTATCCGG AGTTGCTGAC CGGCACCTTC AGCTGGAATC CGTACGACTT CTTCGGCCTG TACGGACACG AGGCCTGGCC GAAGGGCAAG CGCTCCAAGC TCAGCGGCGC GCAGTTCGCG CCGGTCGCCG ATCTCAGTGC CAATCTCGAC CGGATCGAGG CGTTGGCACG CCAGGCGAAG GCGGATGGCG CCGAGATGGT GGTGTTTCCG GAACGGAGCC TTACCGGACT GGATGATCCG GCGCGTACTG CCGTCGCTGT GCCTGGCCCC GCGACCGACC GGCTCGCCGC GCTGGCAAGC GAGCTGTCGC TGTATCTCGT CTGCGGTCTC GCCGAACGCG ACGGCGATAT CCTGTACAAC AGTGCCGTGC TGATCGCGCC GGGCGGCACC ATCACCACCT ATCGCAAGAC GCATCTGACC GAGGACGAGC GGGGCTGGGC GCAGCCTGGC GACAGCTTCG TCGTGAGCGA TACGCCGCTT GGCCGCGTCG GCCTGCTGAT CGGCCACGAT GCGATGTTTC CTGAAGCCGG GCGCGTGCTG GCGCTCCGCG GCTGTGACAT CATCGCGTGC CCGGCGGCGA TCGAGACCCG GTTCAGCACG CCGCACGCCG GCACCAGCGT CAAACAGTCG GCACCGATCC CGACTGGCGC CGATCCGCAC CATTGGCATC ACTTCCGCGT CCGCGCCGGC GAGAACAATG TGTTCTTCGC TTTCGCCAAT GTGGTGGATA GAGCGCGCGG CTATCCCGGG CTGAGCGGCG TGTTTGGGCC GGATACGTTC GAATTCCCGC GCCGCGAGGC ACTGATCGGG AGCGAGGAGG GCATTGCCAC CGCGATGATC GACACCTCCA ATCTCGACAG CGTGTATCCG ACCAATGTGG TGCGGCGGAA GGATCTGGTG GCGATGCGGA TGCCGCACAG CTATCGGCCG CTGGTGCAGG CGATGGCCGG CAACTACTAA
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Protein sequence | MSQLLKVATV QFEPIMAEKE RNVARLLELC EEAAVGGAKL IVTPEMGTTG YCWYDRAEVA PFVEPIPGPT TARFAALARK HDCYIVVGLP EVDEDGIYYN SAVLIGPEGL IGRHRKTHPY ISEPKWSAAG DLHNQVFDTP IGRIALLICM DIHFVETARL MALGGADIIC HISNWLAERT PAPYWISRAF ENSCYVIESN RWGLERTVQF SGGSCVIAPD GGIAAVIDGG DGVAFAEIDL DTARARQIGG EAVFRQRRPE LYPELLTGTF SWNPYDFFGL YGHEAWPKGK RSKLSGAQFA PVADLSANLD RIEALARQAK ADGAEMVVFP ERSLTGLDDP ARTAVAVPGP ATDRLAALAS ELSLYLVCGL AERDGDILYN SAVLIAPGGT ITTYRKTHLT EDERGWAQPG DSFVVSDTPL GRVGLLIGHD AMFPEAGRVL ALRGCDIIAC PAAIETRFST PHAGTSVKQS APIPTGADPH HWHHFRVRAG ENNVFFAFAN VVDRARGYPG LSGVFGPDTF EFPRREALIG SEEGIATAMI DTSNLDSVYP TNVVRRKDLV AMRMPHSYRP LVQAMAGNY
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