| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2664 |
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| Symbol | |
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| ID | 6410327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2894245 |
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| End bp | 2895117 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642712540 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001991649 |
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| Protein GI | 192291044 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | [TIGR03622] urea ABC transporter, permease protein UrtB |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.113127 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACATCG CCACCTTCGC CTTCGCGGCG CTGTATCAAT TCGCCGACGC CTTTGCCTTC
CTGGTGCTGT CGGCCTGCGG GCTCGCCGTC ATCTTCGGCA TGATGGGCGT CATCAATCTC
GCCCACGGCG AGTTCATCAT GTGCGGCGCC TACGTCACCG CCACCGCGGC TCACGCCGGA
CTGCCGCTGC CGCTCGCCAT TCTGACCGGT GCGCTGGTTT CGGCGATGGT CGGCATGCTG
GTCGAGTTCG TGGTGGTGCG GCATCTCTAT GAACGCCCGC TCGACACCAT CGTCGCCACC
TGGGGCCTCA GCCTGATCGC GACGCAAGGC ACACTGATCG TGATCGGCTC GACCATGGCT
GGTGTCGGTA CGCCGTTCGG CAGTTTTCAG GTCGGCGCCT ATTCCTATTC GATCTACCGG
ATCGTGCTGT TTCTGGCCGC GCTCGGCGTG CTCGGCGGGC TGTACGCGGT GTTCAACTGG
ACGTCGTTCG GCGTCAAAGC ACGCGCCACC ATCCAGGTGC CGCACATGGC GGATGCGCTC
GGCGTCGACA CCCGCTGGAT CTACAGCCTG ACCTTCGCCT GCGGCGCCGG GCTCGCCGGA
CTGGCGGGCG GGCTGTACGC GCCGACCATG ACATTGGTGC CGACGATGGG CGCGACCTTC
CTGATGGAGG CGTTCGTCAC GGTGGTGATC GGCGGCGCCG ACGTGTTCCT CGGCACAGCG
CCGGCCGCGG CAGTCCTGGC AGTGGTGAAG TCGGCGATGA CCTCCTGGCA GGGCCAGTTG
TTCGGTCAGA TCGGCCTGTT GGTCGCGGTG ATCATCGTGG TTCGGGTGCT GCCGAAAGGC
ATCTCGGGCT TCCTGCTGCG TGAACGGACC TGA
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| Protein sequence | MDIATFAFAA LYQFADAFAF LVLSACGLAV IFGMMGVINL AHGEFIMCGA YVTATAAHAG
LPLPLAILTG ALVSAMVGML VEFVVVRHLY ERPLDTIVAT WGLSLIATQG TLIVIGSTMA
GVGTPFGSFQ VGAYSYSIYR IVLFLAALGV LGGLYAVFNW TSFGVKARAT IQVPHMADAL
GVDTRWIYSL TFACGAGLAG LAGGLYAPTM TLVPTMGATF LMEAFVTVVI GGADVFLGTA
PAAAVLAVVK SAMTSWQGQL FGQIGLLVAV IIVVRVLPKG ISGFLLRERT
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