Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2642 |
Symbol | |
ID | 6410304 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 2864643 |
End bp | 2866664 |
Gene Length | 2022 bp |
Protein Length | 673 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642712518 |
Product | anaerobic ribonucleoside triphosphate reductase |
Protein accession | YP_001991628 |
Protein GI | 192291023 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
TIGRFAM ID | [TIGR02487] anaerobic ribonucleoside-triphosphate reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTGTTT CCGACCTGAC CAACCTTCCT CGAGCGATCA TCAAGCGGAG CGGCGCTGAA GCTGCGTTCG CCAGCGCCAA GATCCGATCC GCGATCGCGC GCGCCGGACA GGCCACGGGG GAGTTCGGCG AACTCGAAGC GGGGCTTCTC ACCAGTCAGT CGGTCAAGGT GATTGCGCAC CGCTTCGCCG GCGCCGTGCC GCAGATCGAG CAGATTCAAG ATATCGTCGA GCAGGTGCTG ATCTCGGCGA ACCATCTGAC CACCGCGCGG GCGTACATCG TCTATCGCGA AAAGCGTTCC CAGGCGCGCA ACGACCGCAA GGTCGCCGTC GATGCGATCG CGTCGATCAA CGAATATCTC GACCGCACCG ACTGGCGGGT CAACGCCAAT GCCAACCAGG GCTATTCACT CGGCGGCCTG ATCCTCAATC TGTCCGGCAA GGTGGTCGCC AACTACTGGC TGTCGCACGT CTATCCGCCG GAAGTCGGCC GCGCCCATCG CGACGGCGAC CTGCATATTC ACGACCTCGA CATGCTGTCC GGCTACTGCG CCGGCTGGTC GCTGCGCATG TTGCTCACCG AGGGCTTGAA CGGCGTGCCC GGCAAGGTCG AGGCCAGCCC GCCGAAGCAT CTGTCGAGCG CAATCGGCCA GATCGTCAAT TTTCTCGGCA CGCTGCAGAA CGAATGGGCC GGCGCCCAGG CGTTCAGCTC GTTCGACACC TATCTCGCGC CGTTCCTGCG CAAGGACGGG CTGAGCTACG CCGACGTGCT GCAGGGCATC CAGGAACTGG TCTACAACCT CAACGTCCCG TCGCGCTGGG GCACGCAGAC GCCGTTCACC AACCTCACCT TCGACTGGAC CTGCCCGGAA GATCTGCGCG ACGAGGTGCC GGTAATCGGC GGCGAGGAGA TGGACTTCAC CTATGGTGAG CTTCAGCCCG AAATGGACAT GATCAACCGC GCCTACATGG AGGTCATGAC CAAGGGCGAC GCCAAAGGAC GCGTCTTCAC CTTCCCGATC CCGACCTACA ATATCACGCC GGATTTTCCC TGGGAGAGCG AGAACGCCGA ACGGCTGTTC GAGATGACCG CGAAATACGG CCTGCCCTAC TTCCAGAACT TCCTGAACTC CGAACTGAAG CCGCACATGA TCCGTTCGAT GTGTTGCCGG CTGCAGCTCG ATCTCACCGA ACTCTTGAAG CGCGGCAACG GCCTGTTCGG AAGCGCGGAG CAGACAGGCT CGATCGGCGT GGTGACGATC AACTGCGCGC GGCTCGGTCA TCGGCACCGC GGCGACGAAG CGGGGCTGCT GCGCGCGCTC GATACCCTGC TCGACATCGC CCGCACCAGC CTCGAGATCA AACGCAAGGT GGTGCAGCGC TACATGGACG ACGGGCTGTT CCCCTATTCG AAGCGTTATC TCGGCACGCT GCGCAACCAT TTCTCCACCG TCGGCATCAA CGGCGTCAAC GAAATGATCC GCAACTTCAC CGCGGACTGC GAGACCATCG CGACGCCGTG GGGGCACGGC TTCGCCGTCC GTGTCCTCGA CCATGTGCGC GCCAGGATCG TCGCGTTCCA AGAGCAGACC GGCAATCTGT ACAATCTCGA GGCCACGCCG GCGGAAGGCA CGACCTATCG GTTCGCCAAG GAAGACCGCA AGCGCTTCCC CGGCATCCTG CAGGCCGGCA CCGAGGACAA TCCGTACTAC ACCAACTCAA GTCAGCTTCC GGTCGGCTTC ACCGACGATC CGTTCGAGGC GCTGGAACGC CAGGACGATC TGCAGCGCAA ATACACCGGC GGGACAGTAC TGCATCTCTA CATGGGATCG AAGCTGTCGT CCGGCGAGGC CTGCAAGAAG CTGGTGCGAC GCGCGCTGGA GAACTTCCGG CTGCCTTACG TCACGGTGAC ACCGACCTTC TCGATCTGCC CAACCCATGG CTATATCGAA GGCGAACACG CCTTCTGCCC GAAATGCGAC GCCGAACGCC TCGCGGCCAA GCGGCTCGCC GCCACCCACT GA
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Protein sequence | MPVSDLTNLP RAIIKRSGAE AAFASAKIRS AIARAGQATG EFGELEAGLL TSQSVKVIAH RFAGAVPQIE QIQDIVEQVL ISANHLTTAR AYIVYREKRS QARNDRKVAV DAIASINEYL DRTDWRVNAN ANQGYSLGGL ILNLSGKVVA NYWLSHVYPP EVGRAHRDGD LHIHDLDMLS GYCAGWSLRM LLTEGLNGVP GKVEASPPKH LSSAIGQIVN FLGTLQNEWA GAQAFSSFDT YLAPFLRKDG LSYADVLQGI QELVYNLNVP SRWGTQTPFT NLTFDWTCPE DLRDEVPVIG GEEMDFTYGE LQPEMDMINR AYMEVMTKGD AKGRVFTFPI PTYNITPDFP WESENAERLF EMTAKYGLPY FQNFLNSELK PHMIRSMCCR LQLDLTELLK RGNGLFGSAE QTGSIGVVTI NCARLGHRHR GDEAGLLRAL DTLLDIARTS LEIKRKVVQR YMDDGLFPYS KRYLGTLRNH FSTVGINGVN EMIRNFTADC ETIATPWGHG FAVRVLDHVR ARIVAFQEQT GNLYNLEATP AEGTTYRFAK EDRKRFPGIL QAGTEDNPYY TNSSQLPVGF TDDPFEALER QDDLQRKYTG GTVLHLYMGS KLSSGEACKK LVRRALENFR LPYVTVTPTF SICPTHGYIE GEHAFCPKCD AERLAAKRLA ATH
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