Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2626 |
Symbol | |
ID | 6410288 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 2843309 |
End bp | 2844286 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642712502 |
Product | transport system permease protein |
Protein accession | YP_001991612 |
Protein GI | 192291007 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4606] ABC-type enterochelin transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.404652 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCGCAG TCGAGCGAAC GGCGTCGCGC TCCGCCGGGG CGACCGCGCT GCTGGCGCTT GTCGCCCTGT TCGTCGTCAG CATCTTCGTC GGCGTTGGCG AGGTCGCACC GCGCGATGTC TTCACCAGTC CCGATGCGCT GTATCTCGTC GTCGCGAGCC GGCTGCCGCG CACGCTGGCC GCGGTTCTGA CCGGTGCCGG CCTCGCGATT GCCGGCCTGG TGATGCAGAC CCTGGCGCGT AACCGGTTCG TTGAGCCGAC CACGGCGGGC ACCGGCCAGA GCGCTGCGCT CGGCATCCTG TTGGTCGCGC TGTTGCTCCC CTCGGCCTCA ATCGCCACCA AGACACTGGT CGCGAGCCTG ACCGCCCTCG CCGGCACATC GCTGTTCCTG GCGATCGCCC ATCGGCTGCC GCCGACGCAG CCGTTTCTGG TGCCGTTGTT CGGGCTGGTC TATGGCGGCG TGGTCGGCGC CGCCGTCACC TTCGTCGCCT GGCACACCGA TCTGCTGCAG TTCATCGAGA TCTGGACCAA CGGCGAGTTC TCCGGCGTCC TGCGTGGCCG CTACGAACTC CTCTGGGCCT CGGCCGCGGT CCTTGCCATG ACCTGGGTGT TCGCCGACCG CCTCACTTTG ATGTCGCTTG GACGTGACGT CAGTGTCGGA CTGGGGCTGG ACTATGCCCG CATGATGCAA ATCGGGCTGC TGATCATCTC GATCGTCACC GCGCTGACCG TGGTCATCGT CGGGATGATC CCGTTCGTCG GGCTCGTCGT CCCCAACATG GTCTCGCGGC TGATCGGCGA CAACATGCGG TCGCTGATCC CCTGGGTAGC GGGGAGCGGC GCCGCGCTGG TGCTCGCATG CGACATCATC GGCCGGCTGC TGCATTTCCC GTACGAGATC CCCGTCGGCA CCGTGCTCGG AGTCGTCGGC GCGGCATCTT TCCTGTGGCT TCTATTGCGC CGTCCTTCCC ATGCGTGA
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Protein sequence | MIAVERTASR SAGATALLAL VALFVVSIFV GVGEVAPRDV FTSPDALYLV VASRLPRTLA AVLTGAGLAI AGLVMQTLAR NRFVEPTTAG TGQSAALGIL LVALLLPSAS IATKTLVASL TALAGTSLFL AIAHRLPPTQ PFLVPLFGLV YGGVVGAAVT FVAWHTDLLQ FIEIWTNGEF SGVLRGRYEL LWASAAVLAM TWVFADRLTL MSLGRDVSVG LGLDYARMMQ IGLLIISIVT ALTVVIVGMI PFVGLVVPNM VSRLIGDNMR SLIPWVAGSG AALVLACDII GRLLHFPYEI PVGTVLGVVG AASFLWLLLR RPSHA
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