Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2580 |
Symbol | |
ID | 6410242 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 2789588 |
End bp | 2789911 |
Gene Length | 324 bp |
Protein Length | 107 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642712458 |
Product | hypothetical protein |
Protein accession | YP_001991568 |
Protein GI | 192290963 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.004107 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGCCAC TTCTGAGATT TGCGTCTGGT ATCCTCGTCG GCGTCGTCGG CGTGCACCTG CTGAAGCAGG CCAAAGCGCC GGAAGCCGTT AAGTCGTTTG CCCAGAAGGC CCGCAGCGGA CTGGACAAGG CCGGCGAGGA CTTGCGCGAA GCGACCGTCT CCGGCCTCAG CGCAGTCGAG AAATCCAGCG CCGCGCTCCG ATCGAAGCTG TCCAACACCA CGGATAGTAG CGAAGCGGCG ACCGACGATG CGCCAACCCC GGCGACAACC GAGACCGCAC CAGCCCCGTC CGCCGACCAG ACCGCCACGA ATGAAAAAGC GTAA
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Protein sequence | MLPLLRFASG ILVGVVGVHL LKQAKAPEAV KSFAQKARSG LDKAGEDLRE ATVSGLSAVE KSSAALRSKL SNTTDSSEAA TDDAPTPATT ETAPAPSADQ TATNEKA
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