Gene Rpal_2551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2551 
Symbol 
ID6410213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp2758637 
End bp2759722 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content67% 
IMG OID642712429 
Productperiplasmic binding protein 
Protein accessionYP_001991539 
Protein GI192290934 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.391022 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGTCAT CATTGCGATG GATGACACTC GCGGTCGCCG TGGTGATCTG TGTCTCGGCA 
ATGGCCGGTT CGGCTTGGGC GGCGGAGTTG ACCGACCAGC GTGGACAGAC CGTCGCCGTC 
ACCACTCCGG CCCAGCGCGT CGTGTTTCTG CCGATGCCGG CGCCATCGAC CTATATGGCG 
ATCGACCGCT CGGCGGCGCA TGTCGCCGGG ATGAATCCGG CATCGGCAAC TGCCATGCGC 
ACCGGCATCC TCAGCCGCAT TTTTCCGTCC GTCGATCAGA TCCCGACTGG TATCACCCGC 
GGCGCCGGCA TAGTGCCGAA TGTCGAGGCG ATCATGGCGC TGCATCCGGA CGCGGTGTTG 
CAATGGGCGA CGTCGGGCGA CGAGCCGATT GCGATGCTCG ATCGCGCGGG GCTCACAGTG 
CTGGGGCTGC GCTATGGCGG CCAGGACGAG GTCGAGGGCG CGATCCTGAT GATGGGGCGC 
CTTGCAGGGC AGGAGGCGCG TGCGGGCAGA ATCGTCGAGC GATTGCGGCA GCGCCAGGAC 
GTGCTCGCGA CAACGTTCAG GGCAACGCCG GATGCTGAGC GGCCGCGGGT GCTGCACCTG 
TCACGCGCCT CGGATTCGTT CGCCGTCGCC GGTCGCGACA CCTACACGGA TTTCGTGATC 
CGTACTGCGG GCGGCCGCAA CGCGGCCGGG GAGGTCGGCG GCAGCCGCAC CGTGACGTTG 
GAGCAGCTGC TGGTGTGGAA TCCGGATGTC ATCCTGCTCG GCAATTTCGA CACGGCGATG 
CCGGCCGACC TGTATGGCGA TCCGCGTCTG CAGGGCATTG CCGCGATCAA GCAGCGGCGG 
GTGTATCGTG TGCCGCTCGG CGGCTATCGC TGGGACCCGC CGAGCCACGA GTCGGCGCTG 
GCGTGGACAT GGCTCGCGAA ACTGCTGCAT CCGGATCGGC TGACGACCGA TCTGCGCACC 
GAGATGCGTG ACTGGTACAG CTTCCTCTAC GATCACGCGC TGGCCGATGC CGAGATCGAC 
GCCATTCTGC AGACACCGCA GAACAGCGGG TCTGCCGGCT ACGCGCGGTT TGCGGCTGCG 
CGATGA
 
Protein sequence
MRSSLRWMTL AVAVVICVSA MAGSAWAAEL TDQRGQTVAV TTPAQRVVFL PMPAPSTYMA 
IDRSAAHVAG MNPASATAMR TGILSRIFPS VDQIPTGITR GAGIVPNVEA IMALHPDAVL 
QWATSGDEPI AMLDRAGLTV LGLRYGGQDE VEGAILMMGR LAGQEARAGR IVERLRQRQD 
VLATTFRATP DAERPRVLHL SRASDSFAVA GRDTYTDFVI RTAGGRNAAG EVGGSRTVTL 
EQLLVWNPDV ILLGNFDTAM PADLYGDPRL QGIAAIKQRR VYRVPLGGYR WDPPSHESAL 
AWTWLAKLLH PDRLTTDLRT EMRDWYSFLY DHALADAEID AILQTPQNSG SAGYARFAAA 
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