Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2545 |
Symbol | |
ID | 6410207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 2750140 |
End bp | 2751831 |
Gene Length | 1692 bp |
Protein Length | 563 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642712423 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_001991533 |
Protein GI | 192290928 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAACA CCCATCCTGC GGTCGCAGCC ATTGAAGATT ATGCCGACGT CCTGGCGCGG TTTCGCCGCG AGGACCTCGA AGCCCTGTTC GACGGCAACT TCGCGATCGG CATCAACGTC TGCATCGAAT GCTGCGACCG TCACGTCGCC GGCGGCGGCA CGGCACTGGA TTGGGAGAGC CAGGACGGCC GCACCGCGTC CTTCAGCTTT GCCGAGATGA AGGACTATGC GGCCCGCGTC GCCAATCTGC TGGTCGCGCA GGGCGTGAAG CCCGGCGACG TCGTCGCCGG CATGCTGCCG CGGACGCCCG AACTGCTGGC GCTGATCCTC GGCACCTGGC GCGCCGGTGC GGTCTATCAG CCGCTGTTCA CCGCGTTCGG TCCGAAGGCG ATCGAGCACC GCGTCAAGAT GAGCGCCGCC AAGCTGGTGG TCACCGATCT GGCCAACCGC GCCAAGCTCG CCGACGTCGC CGATTGCCCG ACCGTCGCGA TCGTGCTCCG GCCGGGCGAG ACCGCGCCGC TCGGCGATCT CGATTTCCAT GCCGAGATCG CGGCGCAATC GACCGAATTC GCTCCGGTGC TGCGCAAGGG CACCGACCTG TTCCTGATGA TGTCGACCTC CGGCACCACC GGTCTGCCGA AGGGCGTGCC GGTGCCGATC AACGCGCTGC CGGCGTTCTA TTCGTACATC CGTGATGCGG TCGATCTGCG CGCGGGCGAC ATCTTCTGGA ACATCGCCGA TCCGGGCTGG GCCTATGGCT TGTACTACGC GGTCACTGGC CCGCTGCTGC ACGGCCACGC CACCACCTTC TACGACGGTC CGTTCACCGC CGAGAGCACC TATGGCCTGA TCAAGCGCCG CGGCATTACC AACCTCGCCG GTGCGCCGAC CGCGTATCGG CTGCTGATCG CAGCGGGTCC GGAAGCGGCG GCGCCGGTGA AGGGCCAGCT CCGCGTCGTC TCTAGCGCCG GCGAGCCGCT CAATCCCGAA GTGATCCGCT GGTTTGCCGA GCATCTCGCC GCGCCGATCC ACGATCATTA CGGCCAGACC GAGCTCGGCA TGGTGGTCAA CAATCATCAC CGCCTGCGCC ACACCGTGCA TCCGGGTTCC GCCGGGCTCG CGATGCCGGG CTTCCGCGTC GCGGTGCTCG ACGAGCACAG CAACGAACTG CCGCCGAACG TCCCGGGCGT GCTCAGCGTC GATTTGAAGC GTTCGCCGCT GATGTGGTTC TCCGGCTACT GGCAGCAGGA GACGCCGGCG ATCGAAGGCG GTTACTACCG CACCGGCGAC ACCGTCGAAC TGGAGCCGGA TGGGTCGATC AGCTTCGTCG GCCGGGCCGA CGACGTCATC ACCTCGTCGG GCTATCGCAT CGGTCCGTTC GACGTCGAGA GCGCGCTGAT CGAACACGCC GCGGTCATCG AGGCGGCGGT GATCGGCAAG CCCGATCCCG AGCGCACCGA GATCGTCAAA GCCTATGTGG TGCTCGCCAA GGACGTGACG CCGAGCGAAG CTCTGGCCGA GGAGCTGCGG CAATACGTCA AGAAGCGGCT CTCCGCGCAC GCCTATCCGC GCGAGATCGA ATTCCTGGAG CAACTCCCGA AGACGCCGAG CGGCAAGCTG CAGCGCTTCA TTCTGCGCAA GCGCGACACC GAACCCGCGA GCACGACCCA GGGCTCTTCT TCTGCAGCTT GA
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Protein sequence | MSNTHPAVAA IEDYADVLAR FRREDLEALF DGNFAIGINV CIECCDRHVA GGGTALDWES QDGRTASFSF AEMKDYAARV ANLLVAQGVK PGDVVAGMLP RTPELLALIL GTWRAGAVYQ PLFTAFGPKA IEHRVKMSAA KLVVTDLANR AKLADVADCP TVAIVLRPGE TAPLGDLDFH AEIAAQSTEF APVLRKGTDL FLMMSTSGTT GLPKGVPVPI NALPAFYSYI RDAVDLRAGD IFWNIADPGW AYGLYYAVTG PLLHGHATTF YDGPFTAEST YGLIKRRGIT NLAGAPTAYR LLIAAGPEAA APVKGQLRVV SSAGEPLNPE VIRWFAEHLA APIHDHYGQT ELGMVVNNHH RLRHTVHPGS AGLAMPGFRV AVLDEHSNEL PPNVPGVLSV DLKRSPLMWF SGYWQQETPA IEGGYYRTGD TVELEPDGSI SFVGRADDVI TSSGYRIGPF DVESALIEHA AVIEAAVIGK PDPERTEIVK AYVVLAKDVT PSEALAEELR QYVKKRLSAH AYPREIEFLE QLPKTPSGKL QRFILRKRDT EPASTTQGSS SAA
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