Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2485 |
Symbol | |
ID | 6410147 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 2680606 |
End bp | 2681082 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642712364 |
Product | hypothetical protein |
Protein accession | YP_001991474 |
Protein GI | 192290869 |
COG category | [S] Function unknown |
COG ID | [COG1671] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0772671 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGACG CCCTCACCCG CATCTATGTC GACGCCGACG CCTGTCCGGT GAAGGACGAG GTGTACAAGG TGGCCGAGCG TCACCATCTT CCGGTGACGT TGGTGGCAGG CGGCTTCATC CGGGTGCCGC AGCATCCACT GATTGAGCGC GTCGCGGCCG GTTCCGGCAT GGATGCGGCC GACGATTGGA TTGCGGAGCG GATCAAACCG GGCGATATCG TCATCACCGC GGACATTCCG CTGGCGAGCC GCTGCGTCAA AGCGGGAGCC ACCGCGATCG CTCCGAACGG CAAGCCGTTC ACCGAGGAGT CGATCGGCAT GACGCTGGCG GTGCGCAATC TGATGACCGA TCTGCGCTCG ACCGGCGAGA TCACCGGCGG CCCGCGCGCG TTTTCGCCGC GCGACCGCTC CACCTTTCTT TCGGCGCTCG ATAGCGCGAT CCGCAGGATC GCGCGCCGCA GGGCCGCTCC GACCTGA
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Protein sequence | MTDALTRIYV DADACPVKDE VYKVAERHHL PVTLVAGGFI RVPQHPLIER VAAGSGMDAA DDWIAERIKP GDIVITADIP LASRCVKAGA TAIAPNGKPF TEESIGMTLA VRNLMTDLRS TGEITGGPRA FSPRDRSTFL SALDSAIRRI ARRRAAPT
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