| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2403 |
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| Symbol | |
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| ID | 6410065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2592412 |
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| End bp | 2593800 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642712282 |
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| Product | ABC transporter nitrate-binding protein |
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| Protein accession | YP_001991392 |
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| Protein GI | 192290787 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0310148 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTACGT TCGACAATCC GTTCGATCCC AATCGCCGGC TGCACACCAC GGGTTGTAGT
TGTGGTCGTC ACGCTACCGA GGCTGAGCAC GCTGCCGAGC AGGCCGCCGC GTTGCAGGGC
ACCGTGATGC AGGGCGAAGA GAAGCGGTTC GAAGGCGTCG TCGCGTCCGC GGTGATGCGC
GCAATGTTTC CGCAGGATGC CTCGCGGCGC GCCTTTCTGA AGTCGGTCGG CGCTGCCACG
GCACTCGCCG CGGTGTCGCA GTTTTTCCCC CTGCAGACCG CAACCGATGT GTTCGCCTCG
GGCGGTCCGC TGGAAAAGAC CGACCTCAAG GTCGGTTTCA TTCCGATCAC CTGCGCTACG
CCAATCATCA TGGCGCATCC GATGGGCTTC TATGCGAAGT ACGGCCTCAA CGTCGAAGTG
ATCAAGACCG CAGGCTGGGC GGTGATCCGC GACAAGACGC TGAACAAGGA ATACGACGCC
GCGCATATGC TGTCGCCGAT GCCGCTGGCG ATCACGATGG GCGTCGGCTC CAATCCGATC
CCGTACACCA TGCCGGCGGT CGAGAACATC AACGGCCAGG CGATCACCCT GGCGATGAAG
CACAAGGATC GCCGCAATCC GAAGGACTGG AAGGGCTTCA AATTCGCCGT TCCATTCGAC
TATTCGATGC ACAATTACCT GCTCCGCTAC TATTTGGCCG AGCATGGTCT CGACCCCGAC
GTCGACGTCC AGATCCGCGC CGTGCCGCCG CCGGAAATGG TCGCCAACCT GCGTGCCGAC
AATATCGACG GCTATCTCGC GCCCGATCCG ATGAACCAGC GTGCGGTCTA TGACGGAGTC
GGCTTCATCC ACATCCTCAC CAAGGAAATC TGGGACGGCC ACCCGTGCTG CGCCTTCGCC
GCGTCGAAGG AATTCGTCAC CTCGATGCCG AACACCTACG GCGCGCTCCT GAAGTCGATC
ATTGAGGCGA CCGCCTACGC GCACAAGCCG GAGAACCGCA AGGAAATCGC CCAGGCGATC
TCGCCGGCGA ACTACCTGAA CCAGCCGGCG ATCGTACTCG AACAGATACT CACCGGCACC
TATGCGGACG GCCTCGGCAA CGTCGTCAAG CAGCCGAACC GGATCGATTT CGATCCGTTC
CCGTGGCAGT CGTTCGCGAT CTGGATCATG ACCCAGATGA AGCGCTGGGG GCAGATCAAG
GGCGACGTCG ACTACAAGAC GATCGCCGAG CAGGTCTATC TGGCGACCGA CACGGCGAAG
CTGATGAAGG AAGCAGGCCT CGCGGCCCCC GACACCACGT CGCGATCGTT CTCGGTGATG
GGCAAGCCGT TCGATGGCTC CAACCCGGAT CAGTATCTCG CCAGCTTCAA GATCAAGAAG
GCCTCGTAA
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| Protein sequence | MSTFDNPFDP NRRLHTTGCS CGRHATEAEH AAEQAAALQG TVMQGEEKRF EGVVASAVMR
AMFPQDASRR AFLKSVGAAT ALAAVSQFFP LQTATDVFAS GGPLEKTDLK VGFIPITCAT
PIIMAHPMGF YAKYGLNVEV IKTAGWAVIR DKTLNKEYDA AHMLSPMPLA ITMGVGSNPI
PYTMPAVENI NGQAITLAMK HKDRRNPKDW KGFKFAVPFD YSMHNYLLRY YLAEHGLDPD
VDVQIRAVPP PEMVANLRAD NIDGYLAPDP MNQRAVYDGV GFIHILTKEI WDGHPCCAFA
ASKEFVTSMP NTYGALLKSI IEATAYAHKP ENRKEIAQAI SPANYLNQPA IVLEQILTGT
YADGLGNVVK QPNRIDFDPF PWQSFAIWIM TQMKRWGQIK GDVDYKTIAE QVYLATDTAK
LMKEAGLAAP DTTSRSFSVM GKPFDGSNPD QYLASFKIKK AS
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