Gene Rpal_2351 details

Gene Information

• Locus tag: Rpal_2351
• ID: 6410013
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: +
• Start bp: 2538742
• End bp: 2540679
• Gene Length: 1938 bp
• Protein Length: 645 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 642712231
• Product: nitrous-oxide reductase
• Protein accession: YP_001991341
• Protein GI: 192290736
• COG category: [C] Energy production and conversion
• COG ID: [COG4263] Nitrous oxide reductase
• TIGRFAM ID: [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGCGACC AGGATCACGA ACACGGCCTT AGCCGACGAA CGCTACTCGG AAGCAGTGCC 
GTCGCAGCCG GCGTCGGCCT CGTCGGCGGC GCCACCCTCG GCACCGGCGG CACGCTGATC 
GCCACTGCCG AAGCGCAGAC CAAGCCGAGC AGCCCGGCGC GCCCGGCGTT TCAGAAGAGC 
GAAGTCCATC CGGGCGAGCT CGACGAGTAC TACGTGTTCT TCTCCAGCGG CCAGACCGGC 
GAGCTCCGGA TCGTCGGTCT GCCGTCGATG CGCGAACTGA TGCGGGTCCC GGTGTTCAAC 
CGCTGCAGCG CCACCGGCTG GGGCCAGACC AATGAGAGCC TCAAGATTCT GACCGAGGGG 
CTTTTGCCTG AGAGCCGCGA GTTCCTGAAG ACCCGTGGTG GTACCTATGT CAACGGCGAC 
CTGCATCACC CGCATCTGTC GTTCACCGAA GGCACCTATG ACGGCCGCTA CGCCTTCATG 
AACGACAAGG CCAATACCCG TGTGGCGCGG GTCCGGCTCG ACGTGATGAA GTGCGACAAG 
ATCATCCAGC TGCCGAACCA GCACACCGTG CACGGCCTGC GCGTCCAGAA ATATCCGCGC 
ACCGGCTACG TGTTCTGCAA CGGCGAAGAC CGCGTTCCGC TGCCGAACGA CGGCCACAAC 
CTGAAGAAGA CCAAGGACTA CCACGCGATC TTCACCGCGG TCGACGGCGA CACCATGAAG 
GTGGCCTGGC AGGTGATGGT CGACGGCAAC CTCGACAACG TCGATGCCGA CTACCAGGGA 
AAATACGCGT TCGCGACCTG CTACAACTCG GAGGAGGGTG TCACCGCCGC CGAGATGACC 
GCCAACGACC AGGACTGGGT GGTGATCTTC AATCTCAAGC GGATCGAAGA GGCGGTGAAG 
AAGGGCGACT TCAAGGAAAT GGGTGGCGTA CCGGTGATCG ATGGCCGCCA CGGCTCGCCC 
TACACCCGCT ACGTGCCGGT GCCGAACGGC CCGCACGGCA TGAACACCGC GCCGGACGGC 
ATCCACATCG TCGCCAACGG CAAGCTGTCG CCGACCGTGA CGGTGATGGA CGTGCGACTA 
TTCGACCAGC TGTTCGACGA CAAGATCAAG CCGCGTGACG TCGTGGTCGC CGAGCCGGAG 
CTCGGCCTCG GCCCGCTGCA CACTGCCTAT GACGGCAAGG GCAACGGCTA CACCACGCTG 
TTCATCGACA GCCAGATCTG CAAGTGGAAC ATCGATTTGG CCAAGCGCGC CTACAAAGGC 
GAGAAGGCCA ATCCAATCAT CGACAAGCTC GATGTGCACT ATCAGCCCGG CCACAACCAC 
ACCTCGATGG GCCAGACCAA GGAAGCCGAT GGAAAGTGGC TGATCTCGCT GAACAAGTTC 
TCCAAGGACC GGTTCCTCAA CGTCGGCCCG CTTAAGCCGG AGAACGATCA GCTGATCGAC 
ATTTCCGGAG AGAAGATGAA GCTTGTGCAC GACGGCCCGA GCTTCGCGGA GCCGCACGAC 
GCAACCATCG TCCATCGCTC CAAAATCAAT CCGATCTCGG TCTGGGATCG GGCCGATCCG 
ATGTTCTCCG ATGCGGTGAA GCAGGCTCAA GCCGACGGCG TGAAGCTGGA GGAAGATTCC 
AAGGTGATCC GCGAGGGTGA CAAGGTGCGG GTCTATATCG TGGCGACCGC GCCAAACTTC 
GGTCTTACCG AGTTCGACGT GAAGCAGGGC GATCACGTCA CCGTCTATGT CACCAACATT 
GATACGGTCG AAGACCTCAC CCACGGCTTC TCGATCGTCA ACTACGGCAT CCAGATGGAA 
GTCGCGCCGC ACGCGACTGC GTCGGTGTCG TTCACGGCCG ATCGTCCCGG TGTGTACTGG 
TATTATTGCT CCTGGTTCTG TCATGCCATG CACATGGAGA TGAAGGGCCG CATGCTGGTC 
GAGCCGCGGA GCGTCTGA 

 

Protein sequence

MGDQDHEHGL SRRTLLGSSA VAAGVGLVGG ATLGTGGTLI ATAEAQTKPS SPARPAFQKS 
EVHPGELDEY YVFFSSGQTG ELRIVGLPSM RELMRVPVFN RCSATGWGQT NESLKILTEG 
LLPESREFLK TRGGTYVNGD LHHPHLSFTE GTYDGRYAFM NDKANTRVAR VRLDVMKCDK 
IIQLPNQHTV HGLRVQKYPR TGYVFCNGED RVPLPNDGHN LKKTKDYHAI FTAVDGDTMK 
VAWQVMVDGN LDNVDADYQG KYAFATCYNS EEGVTAAEMT ANDQDWVVIF NLKRIEEAVK 
KGDFKEMGGV PVIDGRHGSP YTRYVPVPNG PHGMNTAPDG IHIVANGKLS PTVTVMDVRL 
FDQLFDDKIK PRDVVVAEPE LGLGPLHTAY DGKGNGYTTL FIDSQICKWN IDLAKRAYKG 
EKANPIIDKL DVHYQPGHNH TSMGQTKEAD GKWLISLNKF SKDRFLNVGP LKPENDQLID 
ISGEKMKLVH DGPSFAEPHD ATIVHRSKIN PISVWDRADP MFSDAVKQAQ ADGVKLEEDS 
KVIREGDKVR VYIVATAPNF GLTEFDVKQG DHVTVYVTNI DTVEDLTHGF SIVNYGIQME 
VAPHATASVS FTADRPGVYW YYCSWFCHAM HMEMKGRMLV EPRSV