Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2241 |
Symbol | miaA |
ID | 6409901 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 2431667 |
End bp | 2432572 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642712125 |
Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
Protein accession | YP_001991237 |
Protein GI | 192290632 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.118429 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTTATCG CAGGGCCGAC CGCCAGCGGC AAGTCGGCCT TGGCACTGAA GCTGGCGCAA GCGAGCGGCG GCACCGTCAT CAACACCGAT TCGATGCAGG TGTATCGCGA CCTTCGCATC ATCACCGCCC GGCCGACACC GGACGAGGAG GCGCTGGCGC CGCATCGCCT TTACGGCACG GTCGATGCCG CGGTGAACTT CTCAGCCGGG GCTTATGTCG AGGCCGCCGC TGTAGCGCTG GCGGAGGTGC GGGTGGCCGG GCGGCTGCCG ATCCTGATCG GCGGGACCGG GCTGTATTTC AAGGCGCTGA CGCGGGGGCT GTCGGCGGTG CCGCCGGTCC CCGCCGAGGT CCGCGACGCG GTGCGGCTGC GGCTCGACCG GGACGGCGTC CAGGCGCTGC ACGCGGAGCT GGCCGGCCAC GATCCGGAGG CGGCGGCGCG GCTGGCGCCA GCCGACCGGA CGCGAATCGC CCGCGCGCTG GAGGTGGTGC TGGCGACCGG TCGGCCATTG GCCGACTGGC ACCAGCAGAC CTCGCCGCCG CTGCTGCCGC CGGATGATGT GGTGGCGGTA TTCTTGGCCC CGGATCGCGA GGCGCTCTAC GCGCGGATCG ACTCTCGATT CGCTGCGATG CTGCAGGGGG GGGCACTGAA CGAGGTTGCC GCGTTGGCCG AACGCCAGCT CGATCCGCTG CTGCCGGCAA TGAAAGCTCA CGGTGTGCCG GCGCTGATCC GGCACTTGCG CGGCGAGATC ACTTTGGAAG AAGCGGCTTC GATCGGCGCC GCCGACACCC GCCACTATGC CAAGCGGCAG TTCACCTGGT TTCGACATCA GCTGCCGGAG TTCAAATGGG TGAGGCCGCA GGAGGCGGAC GCATTCCTGA ACACTGTGAT GCCGGGGCGC GCGTGA
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Protein sequence | MLIAGPTASG KSALALKLAQ ASGGTVINTD SMQVYRDLRI ITARPTPDEE ALAPHRLYGT VDAAVNFSAG AYVEAAAVAL AEVRVAGRLP ILIGGTGLYF KALTRGLSAV PPVPAEVRDA VRLRLDRDGV QALHAELAGH DPEAAARLAP ADRTRIARAL EVVLATGRPL ADWHQQTSPP LLPPDDVVAV FLAPDREALY ARIDSRFAAM LQGGALNEVA ALAERQLDPL LPAMKAHGVP ALIRHLRGEI TLEEAASIGA ADTRHYAKRQ FTWFRHQLPE FKWVRPQEAD AFLNTVMPGR A
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