| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2197 |
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| Symbol | |
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| ID | 6409857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2379950 |
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| End bp | 2381338 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642712081 |
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| Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
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| Protein accession | YP_001991193 |
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| Protein GI | 192290588 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3200] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
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| TIGRFAM ID | [TIGR01358] 3-deoxy-7-phosphoheptulonate synthase, class II |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGAAC GCTGGACACC CGATAGCTGG CGCGCCAAGC CGGTGCAGCA GATGCCGCAA
TATCCCGACG CGAAGGCGCT TGCGGATGTC GAGGCGCAGC TCGCGAGCTT TCCGCCGCTG
GTGTTTGCGG GCGAGGCGCG CAACCTGAAG AAGGCGCTGG CCACGGTGGC GGCCGGCGAC
GCTTTCCTGC TCCAGGGCGG CGATTGCGCC GAGAGCTTCG CCGAGCACGG CGCCAACAAC
ATCCGCGACC TGTTCCGCGT CTTCCTGCAG ATGGCGATCG TCTTGACCTA CGCCGGCGCC
TCGCCGGTGG TGAAGGTCGG CCGCATCGCC GGCCAGTTCG CCAAGCCGCG CTCCGCTCCG
GTCGAGAAGC GCGACGGCGT CGAGCTGCCG AGCTATCGCG GCGACATCAT CAATGACGTC
GCGTTCACCG AGGAAGCCCG CGTACCCGAT CCGCGCCGGC AGATCGAAGC GTATCGCCAG
TCGGCCGCGA CGCTCAACCT GCTGCGCGCC TTCGCCAAGG GCGGCTACGC CAGCGTCGAG
AACGTCCATA GCTGGATGCT GCAGTCGGTC AGCGACAGTC CGCAGTCGAA GGCCTATGCG
GATCTCGCCG ATCGCGTTTC CGGCGCGCTG GATTTCATGC GCGCCTGCGG CCTGACCTTC
GCCGTCGATT CCTCGCTCGG CACCACCGAT TTCTACACCA GCCACGAAGC GCTGCTGCTC
GGCTACGAGC AGGCGATGAC CCGCGTCGAC TCGACCACGG GTGATTGGTA CGCGACCTCC
GGCCACATGC TGTGGATCGG CGATCGTACC CGTCAGCTCG ACCACGCCCA TGTCGAGTAT
TTCCGCGGTA TCAAGAATCC GATCGGGCTG AAGTGCGGTC CGTCGCTGAA GACCGACGAA
CTGCTCAAGC TGATCGACAT TCTCAATCCC GACAACGAGC CGGGCCGGCT GACGCTGATC
GGCCGTTTCG GCCATGAGAA GATCGGCGAG CACCTCCCGG CGATGGTTCG CGCCGTGAAG
CGCGAGGGCC GGACCGTGGT GTGGTCGTGC GATCCGATGC ACGGCAACAC CATCACGTCG
AACTCCGGCT ACAAGACCCG GCCGTTCGAC CGCATCCTGT CGGAAGTCCG TTCGTTCTTT
GCGGTCCATG CCGCGGAGGG GACTCATGCC GGCGGCGTGC ATCTGGAGAT GACCGGCCAG
AACGTCACCG AGTGTCTCGG CGGCGCCCGC GCCATCACCG ACGAAGACCT CAACAACCGC
TATCACACCG CCTGCGATCC CCGGCTGAAC GCCGAGCAGT CGATCGACAT GGCGTTCCTG
ATCGCGGACC TCCTGAAGCA GGGTCGGGCC GGCAAGGCCA GCCCGCTGCA GGCGGCGGCT
GGCCTCTGA
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| Protein sequence | MSERWTPDSW RAKPVQQMPQ YPDAKALADV EAQLASFPPL VFAGEARNLK KALATVAAGD
AFLLQGGDCA ESFAEHGANN IRDLFRVFLQ MAIVLTYAGA SPVVKVGRIA GQFAKPRSAP
VEKRDGVELP SYRGDIINDV AFTEEARVPD PRRQIEAYRQ SAATLNLLRA FAKGGYASVE
NVHSWMLQSV SDSPQSKAYA DLADRVSGAL DFMRACGLTF AVDSSLGTTD FYTSHEALLL
GYEQAMTRVD STTGDWYATS GHMLWIGDRT RQLDHAHVEY FRGIKNPIGL KCGPSLKTDE
LLKLIDILNP DNEPGRLTLI GRFGHEKIGE HLPAMVRAVK REGRTVVWSC DPMHGNTITS
NSGYKTRPFD RILSEVRSFF AVHAAEGTHA GGVHLEMTGQ NVTECLGGAR AITDEDLNNR
YHTACDPRLN AEQSIDMAFL IADLLKQGRA GKASPLQAAA GL
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