Gene Rpal_2185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2185 
Symbol 
ID6409845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp2366308 
End bp2367903 
Gene Length1596 bp 
Protein Length531 aa 
Translation table11 
GC content67% 
IMG OID642712069 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001991181 
Protein GI192290576 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAGT CCGCCGAAAA GCCTGAAGTC TTCCAGCTTC CGGCTGAGCC TCCGGTGGCC 
GCGCCGGCGC GCAACCGGCG CGCGGCGGCA CAGCGGGTGC GCGAGGCGCG CGACCGGCTG
ACCTCGACCA GCGGCACCCG CCCCGCTTTC GACCACGAAC TCGTCCGGCA ATATGCCGAG
ACCCGGCTGT CCGCCTCTTA CGTCGTGATG CTGCTGGTGG TCGTCACCGG CGTGCTGTTT
GGGATCTGGA TGGATCCACT GGCGGCGGGC GCCTGGACCG TGGCGATGCT CAGCATCCAC
GCCGTGGTGA TCCGCAACTG CAATCGCTTC CTCAAGGAGC CGGCCTCGGT GCCGCGCACC
CGCACCTGGC GGCGGCGCTT TGTGCTGCTC GACCTGCTGT ATGGGTTGGC GTGGACCGCG
ATCCTGATCC ACCCGACCGA ACTCAACGTC GTTTCCAGCA CGCTTCTGAT GTTCCTGATG
CTGCTGGTGG TGGCGGTGTC GTCGATGCTG GCGGCGAGCC TGCCGATCGC GGCGCTGGCC
GCGACGATGC CGGTGACCGC AGCGATCGCC GTCAACTTCG CGCTCAGCGG CTCGTTCGAC
AAATACGTGC TGGCGGCGCT GACCGTCGCG GCGGAAGGCT ACTTCGCCCT GCTCGCCCAC
CGGCTGCACT CGACCACGCT GGCGACGCTG CAGGCCCGCG CCGAAAAGGA CGTGCTGATC
GCCGAGCTCG AACAATCCAA GGCGATCTCC GACGAGGCCC GGCATCGCGC CGAGGCCGCC
AACGTCGCCA AGTCGCGCTT TCTGGCACAG ATGAGCCACG AGCTGCGCAC GCCGCTCAAC
GCCATTCTGG GCTTTTCGGA AGTGATGAAG AGCGAGATCT TCGGCGCCCA TGCGGTGCCG
GCCTACAAGG ACTACTCGGC CGACATCCAC AATTCCGGCG TCCACCTGCT CAACCTGATC
AACGAAATCC TCGATCTGTC GCGGATCGAG GCCGGCCGCT ACGAGTTGAA CGAGGAAGCG
ATCTCGCTGG TGCATGTGGT GACCGATTGT CATCACCTGC TGAAGCTGCG CGCGACGAGC
CGTGGCATCA CCATCCACGA AGTGTTCGAA CAGGGCATGC CGCGGATCTG GGGCGACGAG
CGCGCGGTGC GCCAAGTGGT GCTCAACCTC TTGTCGAACG CCATCAAGTT CACGCCTCAA
GGCGGCGAGA TCTGGCTGAA GGCCGGCTGG ACGGCGTCCG GCGGGCAGTA TCTCAGCGTC
AAGGACACCG GGTCCGGGAT CCCCGAAGAG GAGATTCCGA TCGTGCTGGC CTCGTTCGGC
CAGGGGTCGA ATTCGATCAA GTCGGCCGAA CAGGGCGCCG GCCTCGGCCT GCCGATCGCC
AAGAGCCTGA TCGACATGCA CGGCGGCACC TTCACCCTGA AATCCAAGCT GCGGATCGGC
ACCGAAGTGA TCGTCACCTT CCCGCCCGAG CGGGTGATGT CGGCGCTGGC GCCGCTCGCC
GACGAGGCGC CGCCGCTGCA GCCGGACACG ATCGACACCT CCGAGAACGC CCGCGCGCGG
CGGCAGCCGA TCATGAACGC CGGCACCGGC TTGTGA
 
Protein sequence
MSESAEKPEV FQLPAEPPVA APARNRRAAA QRVREARDRL TSTSGTRPAF DHELVRQYAE 
TRLSASYVVM LLVVVTGVLF GIWMDPLAAG AWTVAMLSIH AVVIRNCNRF LKEPASVPRT
RTWRRRFVLL DLLYGLAWTA ILIHPTELNV VSSTLLMFLM LLVVAVSSML AASLPIAALA
ATMPVTAAIA VNFALSGSFD KYVLAALTVA AEGYFALLAH RLHSTTLATL QARAEKDVLI
AELEQSKAIS DEARHRAEAA NVAKSRFLAQ MSHELRTPLN AILGFSEVMK SEIFGAHAVP
AYKDYSADIH NSGVHLLNLI NEILDLSRIE AGRYELNEEA ISLVHVVTDC HHLLKLRATS
RGITIHEVFE QGMPRIWGDE RAVRQVVLNL LSNAIKFTPQ GGEIWLKAGW TASGGQYLSV
KDTGSGIPEE EIPIVLASFG QGSNSIKSAE QGAGLGLPIA KSLIDMHGGT FTLKSKLRIG
TEVIVTFPPE RVMSALAPLA DEAPPLQPDT IDTSENARAR RQPIMNAGTG L