Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2180 |
Symbol | |
ID | 6409840 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 2363576 |
End bp | 2364568 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642712064 |
Product | tRNA-dihydrouridine synthase A |
Protein accession | YP_001991176 |
Protein GI | 192290571 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0042] tRNA-dihydrouridine synthase |
TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family [TIGR00742] tRNA dihydrouridine synthase A |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGCCCC ATCAGCCACA TCGCTTCTCC GTCGCGCCGA TGATGGAATG GACCGACAGT CATTGTCGCG TCTTCCATCG GCTGCTGACC CGGCGCGGGC TGCTCTACAC CGAGATGGTC ACCACTGGCG CTGTAATCCA CGGTGATCGG CAGCGGCTGC TCGGCTTCGA TGCGAGTGAG CACCCGGTGG CGCTGCAGCT CGGCGGCTCC AATCCGAATG ACCTCGCGAC CTCGGCGAAG ATCGGTGAGG ACTTCGGCTA CGACGAGATC AACATCAACG TCGGCTGCCC GTCGGATCGG GTGAAGGAGG GCCGGTTCGG CGCCTGCCTG ATGGCGGAGC CCGAGCTGGT TGCCGAAGGC GTCGCCGCGA TGGAGCGCGC GGTCGCCGTG CCGGTGACGG TGAAGTGCCG GATCGGGATC GACGATCAGG ATCCCGAAGT CGCGCTCGAC GCACTGGCGC GGGCGGTGGT CGCAGCCGGC GCCGACGCGC TGATCGTGCA CGCCCGCAAG GCGTGGCTGA ACGGGCTGTC GCCGAAAGAG AACCGCCACA TCCCGCCGCT CGATTACGAT CGGGTGTATC GGCTGAAGCA GGCGATGCCA CAGGTGCCGA TCATCATCAA CGGCGGCATC GGCAGCATCG CGGAAGCCAA GCGGCATCTC GAGCACGTCG ACGGCGTAAT GCTCGGCCGC GCCGCCTATC AGGAGCCGTG GCGGCTTCTC GAGGTCGATC CCGAGCTGTA CGGCGAACCG GCGCCCTATC CCTCGATGAA GGAGGCGCTC GAAGCGCTGA TCCCGTATAT CGAGCGACAG CTTGCGCAGG GCCTGCGGCT GCACGCGATC ACCCGCCACG TCATCGGCGC CTATCAGGGC GTCCCCGGCG CGCGCGCCTT CCGCCGCTAT CTGTCCGAAT TCGGCGTCAA ACCCGATGCC GACGCCAGCG TGCTGTTGAA GGCGATGGTC GCGGTGACGG AGCGGGCGAC GGAAGCTGCC TGA
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Protein sequence | MQPHQPHRFS VAPMMEWTDS HCRVFHRLLT RRGLLYTEMV TTGAVIHGDR QRLLGFDASE HPVALQLGGS NPNDLATSAK IGEDFGYDEI NINVGCPSDR VKEGRFGACL MAEPELVAEG VAAMERAVAV PVTVKCRIGI DDQDPEVALD ALARAVVAAG ADALIVHARK AWLNGLSPKE NRHIPPLDYD RVYRLKQAMP QVPIIINGGI GSIAEAKRHL EHVDGVMLGR AAYQEPWRLL EVDPELYGEP APYPSMKEAL EALIPYIERQ LAQGLRLHAI TRHVIGAYQG VPGARAFRRY LSEFGVKPDA DASVLLKAMV AVTERATEAA
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