Gene Rpal_2138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2138 
Symbol 
ID6409798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp2308089 
End bp2308577 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content63% 
IMG OID642712022 
Producthypothetical protein 
Protein accessionYP_001991134 
Protein GI192290529 
COG category[S] Function unknown 
COG ID[COG1633] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.942475 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAACAG TCGAAGAGTT TCTGGCGCAT TCGATCAAGC TGGAGCAGGA AGCCGCGCTG 
CGGTTCGGTC AGCTCGCCGA CGCGATGGAT AGTTGCGGCA ACAAGGAAGT ATCGAAGCTG 
TTCCGCCAGC TCGCGGACTA CTCGCGGATG CATCAGGCCG ACGCGCAGGC CCGTGCCGGC 
TTCCGCGACA TCCCGCAGAT GGAGCCCGGC GATTTCAAAT GGCCGGGCCT CGAAAGCCCG 
GAAGCCGCCG CGATCTGGGG TACCGACCCG TTCATCGGCC GCGACCTCGC GCTGCAGATC 
GCGCTGGAAG CGGAGACCGG TGCGTTCGAC TGGTACAAGA ACGTCCTCGA CACCACCGAC 
AATCCCGAGA TCAAGATGCT CGCGAAGGAA TTCGTCGAGG AAGAAAGCGG CCACGTCGCC 
GAGCTGCACC GCTGGATCGC GCTGCATAAG GCCGGCAAGC CGCTGCCGAT GGAAATCGTG 
CCGTTCTGA
 
Protein sequence
METVEEFLAH SIKLEQEAAL RFGQLADAMD SCGNKEVSKL FRQLADYSRM HQADAQARAG 
FRDIPQMEPG DFKWPGLESP EAAAIWGTDP FIGRDLALQI ALEAETGAFD WYKNVLDTTD 
NPEIKMLAKE FVEEESGHVA ELHRWIALHK AGKPLPMEIV PF