| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2136 |
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| Symbol | |
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| ID | 6409796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 2305533 |
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| End bp | 2306999 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642712020 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_001991132 |
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| Protein GI | 192290527 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGTCG ATCACCCACC TGCGACATCG CATGTCCGGC AGACCGCCGC CAAAACACGC
CCCTCGGCGC TGGCTCTGAC CATCCTGTTG CTGGGCGGGT TCATCACCGT CTTCGACCTG
TTTGTGGTCA ACATTGCGAT CCCCTCGATG CAGGCCGATC TTGGTGTGAG CTTTGCCGAA
ATCGGCTTCG TCATCGCCGG ATATGAACTG GCCTTCGGCG TGCTGCTGAT CGCGGGCGGG
CGGCTCGGCG ACCGCCATGG CAGACGTCGC CTGTTCGCAC TCGGCATGGC CGGATTTGCG
ATCACATCGT TCCTCTGCGG CATCGCGCCC GACGCCACCA GCCTGATCGT TGCCCGCTTT
CTGCAAGGCG CGACAGGCGC GATCCTGTTT CCGCAGGTCT ATGCGCTGCT ACGTGTCATG
TACGACGATG CTGGCCGCCG CCGGGCATTC GGACTTCTCG GCATGACATT GGGGCTGGCG
GCCATCGTCG GACAGGTCTT CGGCGGCCTG ATCGTTGAAA GCGACCTGTT CGACCTCGGC
TGGCGTATCA TCTTCCTCAT CAATCTACCG ATAGGCATCA TCGCGCTGCT ATCGGCGCGG
ATCATCCCGG AATCGCGCTC TTCCGACGCG ATGGGCGTCG ATTGGCCCGG GATCGGACTG
GCGACAGCGG GATTGCTGCT CCTGCTGTTG CCTCTGCTCG AAGGCCCGAA TCTCGGCTGG
CCGCTCTGGA CATGGGCCAG CATGGCAGCC TCGGTCGTGC TGCTCACGGC GTTTCTCGTC
TGGGAGCATC TGGTTGCAAG GCGCGGCGGC GATCCCGCCA TTGATCTGAC CTTGTTCCGC
AACACCGGCT TCTCGGTGGG GTCTGTGGTA GTGCTGCTGA TCTATTCGAC AGCGACATCG
CTGTTCCTAT GCTTCGCCCT GCTGGTGCAG TCCGGCCTCG GTCTGACGCC GTTCGCGGCC
GGCACGCTGT TCGCGCCGGC GAGCGTCGGC TTCGTGGTGG CATCGCTGGT CGCACCGAAG
CTGGTGGCGC GTTTCGGAAA CATCGCAATC GCCGGTGGCA CGCTGGTCTA TGCAGCCGGC
ATCGGCTGGC TGATCGTGAC CGCCGCAGGT CTCGGCGACG GAGCTGGAAT ATTCGCGCTG
CTGCCGCCGC TGGTGCTGTT CGGCTTCGGA CAGGGCCTGT CGATGACGCC GCTGCTCAAT
CTGGTCATCG GCTATGTCGA GGAAAGTCAT GCCGGAATGG CGGCCGGCTT TATTTCCACC
ATGCAACAGG TCGGCGGAGC CTTCGGCGTT TCCGTTGTTG GCATATTCTT CGTGGGGATT
CTCGGTAAGG ATGCCGGCGA AGGCGTCTCC CAGGCAGGGC GCTACGCGGA CGCCTTCTCC
GGCGCAATGA TCTACAATCT CGCCGCCGTC ATCGTCGCTG CCGCGCTCAT TGCCTTGATC
GTGCGCAAGA GCCCCGCCCG TCAGTAG
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| Protein sequence | MTVDHPPATS HVRQTAAKTR PSALALTILL LGGFITVFDL FVVNIAIPSM QADLGVSFAE
IGFVIAGYEL AFGVLLIAGG RLGDRHGRRR LFALGMAGFA ITSFLCGIAP DATSLIVARF
LQGATGAILF PQVYALLRVM YDDAGRRRAF GLLGMTLGLA AIVGQVFGGL IVESDLFDLG
WRIIFLINLP IGIIALLSAR IIPESRSSDA MGVDWPGIGL ATAGLLLLLL PLLEGPNLGW
PLWTWASMAA SVVLLTAFLV WEHLVARRGG DPAIDLTLFR NTGFSVGSVV VLLIYSTATS
LFLCFALLVQ SGLGLTPFAA GTLFAPASVG FVVASLVAPK LVARFGNIAI AGGTLVYAAG
IGWLIVTAAG LGDGAGIFAL LPPLVLFGFG QGLSMTPLLN LVIGYVEESH AGMAAGFIST
MQQVGGAFGV SVVGIFFVGI LGKDAGEGVS QAGRYADAFS GAMIYNLAAV IVAAALIALI
VRKSPARQ
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