Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2085 |
Symbol | |
ID | 6409745 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 2257576 |
End bp | 2258643 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642711970 |
Product | Choloylglycine hydrolase |
Protein accession | YP_001991082 |
Protein GI | 192290477 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3049] Penicillin V acylase and related amidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.251255 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCGGTT TCAAGCGACG TCTCCTCACC ACCTGCGCCG GCGCACTGGC CATCGCGGGA TCGTTACTGC CGCCGGTCGC CGACGCCTGC ACCCGTCTAG TTTATCTCGG CGCCGACAAT CAGGTGATCA CGGCGCGATC GATGGATTGG GCGCGCGACA TCGGCACCAA TCTCTGGATC TTTCCACGCG GCATCAAGCG CTCCGGCGAG GCCGGCCCCA ATTCGGCACA GTGGACCGCA CGCTACGGCA GCGTGATCGC GTCGGCCTAT GACGTCGCGA CTTCGGACGG AATCAACGAG GCCGGGCTGG TCGCCAACGT GCTGTGGCTG GCGGAATCGC AATATCCGCC GTTCGACGGC TCCAAGCCGG GGCTGGCGCT GTCGCTGTGG CCTCAATATG CGCTCGACAA TTTCGCCACC GTCGCCGAAG CGGTCGAGGC GCTGGCGAAG GAACCGTTCA CGGTCGTCAC AGACAAGATG CCCGGTGAGC AGCGCCTTGC CACTGTGCAC CTGGCGCTGT CGGACGCCTC CGGTGACAGC GCCATCATCG AATACATCGA CGGCAAGCAG GTGATCCACC ACGGCCGGCA ATACCAAGTG ATGACCAATT CGCCGACCTT CGATCAGCAG CTCGCGCTGA ATTCGTACTG GCAGCAGATC GGTGGCACGG TGATGCTCCC AGGCACCAAC CGCGCGGCCG ATCGTTTCGC GCGGGCCTCG TTCTATGTCG GCGCAATTCC TAAAACGCCC GACCCGGTGG AATCGATCGC CGCCGCGTTC AGCGTGATCC GCAACGCGTC GGTGCCGTTC GGCATCTCGA CGCCAGATCA GCCGAACATC TCGTCGACCC GCTGGCGCAG CGTCGCCGAC CACAAGCGCA AACTGTACTT CTTCGAATCC GCGCTGACGC CCAACGTGTT CTGGGTCGAT CTCACCAAGA TCGAGTTCGC GGCCGACAAG GGCGTGGTGA AAAAGCTCGA CCTCGGCCCC GGCCAGAGCA ACGTCTTCTC GGGCGAGGTG CACGATCGCT TCAAGCCGGC GGAGCCGTTC AAGTTTCAGG GACTGTGA
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Protein sequence | MIGFKRRLLT TCAGALAIAG SLLPPVADAC TRLVYLGADN QVITARSMDW ARDIGTNLWI FPRGIKRSGE AGPNSAQWTA RYGSVIASAY DVATSDGINE AGLVANVLWL AESQYPPFDG SKPGLALSLW PQYALDNFAT VAEAVEALAK EPFTVVTDKM PGEQRLATVH LALSDASGDS AIIEYIDGKQ VIHHGRQYQV MTNSPTFDQQ LALNSYWQQI GGTVMLPGTN RAADRFARAS FYVGAIPKTP DPVESIAAAF SVIRNASVPF GISTPDQPNI SSTRWRSVAD HKRKLYFFES ALTPNVFWVD LTKIEFAADK GVVKKLDLGP GQSNVFSGEV HDRFKPAEPF KFQGL
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