| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2063 |
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| Symbol | |
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| ID | 6409723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2234522 |
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| End bp | 2236354 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642711949 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_001991061 |
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| Protein GI | 192290456 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCAGTAT CCAGGATCAT CGGTGAATGT CTCGATGCAT TGCTGCATCC GTCGGCGCGC
TATGACGCGC TGACGACTGC GCGGCATCGT GCGTTCCTTG CGCCGCGTCT GCTTGGAAGC
CTCGCCGCTT TCGCGGCGTT TCCATTGTAT CTGGTTTTGC GTGGCGCTCC GACGGCGCTG
GAAGCGGCTG CATTCTCGTG GCTGATCGCG CCTATTCTGG TGGCTTGGTT CCTGTCGCGC
ACCGGGCGCT ACGAACAGGC ACACTTCCTG TCGTCGCTGG CGCTGACTGC GCTCGTGGTC
GGCGTTGCCG CGCTGACGGG TGGCATTCAA TCTTTCGCAG CTGTGTGGCT GGTGGTGATC
CCGATCGAAG CAGCGCTGTC GGCCTCGCGG CGCGCCGTTA TTTTCGCGGC ATCTCTCGCG
CTCGGCGGCG CGGCGCTGCT GATCGGGCTC GGCCTATTCG GTGTTCTGCC GACGCCGACC
GCCGGTGCCG CGTCCAGCGC GACGCTCGCA GCATTCGGTA TAACCTCGGC GGCGCTGTAC
GCCTCCGGCC TCGCTTACGG TGCGGTGTGG CTGGCGCGGA CCAATGGCGC GCTGCTCAAT
GTCGAGGAGG AGCGCTACCG GCTGCTCGCC CGCAACATGA GCGATGTGAT CTCGCGCCAC
AATCGCAACG GTGCGGTGCG CTTCATTTCC CCGGCAGCCG AGAACCTGCT CGGAACGCCG
GTGGCCCGGC TCGCCGAGCA CGGCCTGTTC GATCGAGTCC ACGTCGCCGA TCGTCCGGCT
TACTTGAAGG CGATGTCGGA TGCGGCGCGC GGCCGCGAAA CCGGCAGCGT CGAATTTCGC
ATCCGCCGCG ATGTAGCGCG CGACGAGCGC GGCCGGCCGT CGGCCGCTGA ATTCGTCTGG
GTCGAGATGC GCTGCCGGCC GCTTGAGTCG AACCTTACTA CCACCGCTGC CTCCAATGCG
GGCGAGACCG AAGTCGTTGC GGTGATGCGC GACATCACCG AGCGCAAGAT TCACGAGCAG
GCGCTCGACC AAGCGCGTGC CGAAGCCGAT CGCGCCGACG CCGCCAAGAG CCGCTTCCTC
GCCACCATGA GCCACGAGCT GCGCACGCCG CTGAACGCGA TCATCGGTTT CTCCGATATG
ATCCTGCAGG ACGACGTGCT GATGCTCGGC CCGGAGCGGC GCAAGGAATA CGCGCAGCTC
ATCAACGATT CCGGTCAGCA TCTGCTGTCG GTGGTCAACG GCATCCTCGA CATGTCGAAG
ATGGAGTCCG GTTCGTTCGA GATCGTGCCG GAGCCGTTCG CACCGCGCCC GGCGCTGCTC
AATTGCTGCA ATCTGCTGGC GCTGAAGGCG CGCGACAGCG GCATCGACCT CGTCACCCGC
GCGCCCGAGA ACCTGCCGGA AGTCGTCGGC GATCCGCGTG CGTTCAAGCA GATCCTGCTC
AACCTGGTGT CGAATGCGAT CAAGTTCACT GAGCGCGGCG GCACGGTCAC TGTCTCGGCA
GCGGTCGAAG GCACGCGGCT GGTTCTGCGC GTCACCGACA CAGGGGTCGG CATTGCCGAA
GAGGATCTGA AGCGCCTCGG CGATCCGTTC TTCCAGGCCG GCAAGACCTA TCAGCGCCGC
CACGAGGGCA CCGGCCTCGG GCTGTCGATC GTTAAGAGCT TGGTGCGGAT GCACGGCGGC
GAGATCGAGG TGCAGAGCCA GATCGATTGC GGCACCACCG TCACGGTGTC GCTGCCGTTG
GCGTTGCCGG CAGGGAGCAA CGTCACAACG TTGAACCCGG CTATGCCGGC GGACTCGCCG
GCGCCAGACT ACCAGGTGAA GAAGAGTGCC TAA
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| Protein sequence | MAVSRIIGEC LDALLHPSAR YDALTTARHR AFLAPRLLGS LAAFAAFPLY LVLRGAPTAL
EAAAFSWLIA PILVAWFLSR TGRYEQAHFL SSLALTALVV GVAALTGGIQ SFAAVWLVVI
PIEAALSASR RAVIFAASLA LGGAALLIGL GLFGVLPTPT AGAASSATLA AFGITSAALY
ASGLAYGAVW LARTNGALLN VEEERYRLLA RNMSDVISRH NRNGAVRFIS PAAENLLGTP
VARLAEHGLF DRVHVADRPA YLKAMSDAAR GRETGSVEFR IRRDVARDER GRPSAAEFVW
VEMRCRPLES NLTTTAASNA GETEVVAVMR DITERKIHEQ ALDQARAEAD RADAAKSRFL
ATMSHELRTP LNAIIGFSDM ILQDDVLMLG PERRKEYAQL INDSGQHLLS VVNGILDMSK
MESGSFEIVP EPFAPRPALL NCCNLLALKA RDSGIDLVTR APENLPEVVG DPRAFKQILL
NLVSNAIKFT ERGGTVTVSA AVEGTRLVLR VTDTGVGIAE EDLKRLGDPF FQAGKTYQRR
HEGTGLGLSI VKSLVRMHGG EIEVQSQIDC GTTVTVSLPL ALPAGSNVTT LNPAMPADSP
APDYQVKKSA
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