Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2052 |
Symbol | |
ID | 6409712 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 2223995 |
End bp | 2225617 |
Gene Length | 1623 bp |
Protein Length | 540 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642711938 |
Product | PepSY-associated TM helix domain protein |
Protein accession | YP_001991050 |
Protein GI | 192290445 |
COG category | [S] Function unknown |
COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCAAGC ACGATCGACA ATCCGCGAGC CGCAGCATCC GGCAGAGCAT GTCGGACCTT CACACCTGGA CCGGGCTGCT GCTCGGCTGG GTGCTGTATG CGATGTTCCT CACCGGCACG GTGTCGTTCT TCAAGGAGGA GCTGTCGCAG TGGATGCGGC CGGAACTGCC GCGCGTGACG CAGGCGCTGG ACCCGGCCGT GGTGGCGGAG CGCGTCGCCG ATGAGATCGG CCGGATCGCG CCCAACGCGA CGCAGTGGAG CATCAAGCTC CCCGAGGGGC GCAGCAACAG CGTCTATGCG TTCTGGCGGC TTCCGATCGC GCAGGATGCG CGCGGCTTCG GAGAAGGGCA CTTCGACGCG GTGACTGGCC GTCAGGTCGA GGCTCGGGGA ACACTGGGCG GCGATTTCTT CTACCGCTTC CATTTCCAGT TCTACTACAT GTCGCCGTTC TGGGGGCGGC TGCTTGCCGG TCTGGCGGCG ATGTTCATGC TGATCGCCAT CGTCGCCGGC GTCATCACCC ACAAGAAGAT CTTCACCGAC TTCTTCACCT TCCGCTGGGG CAAGGGGCAG CGCTCCTGGC TCGACGCCCA CAACGCGCTG TCGGTGTTCG GCCTGCCATT TCATGTGATG ATCACCTACA CCGGGCTGGT GACGCTAATG GCGCTGTACG TGCCATGGGG CGAGCGCGCC GCCATCAAGA CGCCCGCCGA GCGCCAGCAG CTGATGGCGG AGCTCAGTGC TTTCATTCAG CCCGGCAAGC CCGCGGCCGA AGCGGCGCCG CTCGGGTCGA TCGAAACCAT GGTGCGGCAG GCTCAGGTTC GATGGGGTAC GCCCGATGTC GGGCGCGTCA ACGCGGCCAA TCCGGGCAAC GCGGCTGCCC GTATAGCGGT GACCCGTGGC GATGCCGGGC GTGTATCAAT GAGTCCGGAT TACCTGGAGT TCGACGGCGT CACCGGAAAA CTGCTCACCG TGCATGATCA TGTCGGTGCT GCGGCCGAAA CCCGCGGCGT GCTCTACGCG CTGCACATCG GGCGGTTCAG CGACCTCGAA ACCCGGTGGC TTTACTTCAT CGTCAGCTTC ATGGGCACCG CGATGGTCGG TACCGGTCTG GTGATGTGGA CAGTGAAGCG ACGGCAGAAG CTGCCTGATC CAGAGCGGCC GTATTTCGGA TTCCGTCTGG TCGAGCGGCT CAACATTGCC AGCATCGCCG GGCTGTCGAT CGCCATGACG GCGTTCCTGT GGGCCAACCG TCTGTTGCCG ACCGCGATGG CGGAGCGGGC GTTCTGGGAA ATCCATGTGT TCTTCATCGT CTGGGGGCTG ACCTTGCTCC ACGCACTGCT GCGGCCGGCG CGAGTGGCCT GGGTCGAGCA GCTATGGACG GCCGCTGCGT TGTTAGCGTT GATCCCGGTG CTCAACGCGA TGACGACGCT GCGTCCGCTG TGGCACAGCT TCGCTATCGG GGATTGGGTG TTCGTCGGCA CGGATCTGAT GTGCTGGACG CTGGCGCTGC TGCATGCCGT GCTGGCGATC CGCACCGCGC GTCACGGCGC GCGGGTTCGC CCGCCGCGCG GCTCGGCGAC ACGCCACGCG CTCCCAACGA TGTCGAGCGA GGCGGCAACA TGA
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Protein sequence | MTKHDRQSAS RSIRQSMSDL HTWTGLLLGW VLYAMFLTGT VSFFKEELSQ WMRPELPRVT QALDPAVVAE RVADEIGRIA PNATQWSIKL PEGRSNSVYA FWRLPIAQDA RGFGEGHFDA VTGRQVEARG TLGGDFFYRF HFQFYYMSPF WGRLLAGLAA MFMLIAIVAG VITHKKIFTD FFTFRWGKGQ RSWLDAHNAL SVFGLPFHVM ITYTGLVTLM ALYVPWGERA AIKTPAERQQ LMAELSAFIQ PGKPAAEAAP LGSIETMVRQ AQVRWGTPDV GRVNAANPGN AAARIAVTRG DAGRVSMSPD YLEFDGVTGK LLTVHDHVGA AAETRGVLYA LHIGRFSDLE TRWLYFIVSF MGTAMVGTGL VMWTVKRRQK LPDPERPYFG FRLVERLNIA SIAGLSIAMT AFLWANRLLP TAMAERAFWE IHVFFIVWGL TLLHALLRPA RVAWVEQLWT AAALLALIPV LNAMTTLRPL WHSFAIGDWV FVGTDLMCWT LALLHAVLAI RTARHGARVR PPRGSATRHA LPTMSSEAAT
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