| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2030 |
|---|
| Symbol | |
|---|
| ID | 6409690 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 2203404 |
|---|
| End bp | 2204762 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642711916 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001991028 |
|---|
| Protein GI | 192290423 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.789621 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTTGC ACCGCCGCGA CTTCCTCACT GCCCTAGCGA CAGGTAGTGC CCTCACGCTA
ACCGCGTCGC CACTCACCGC CGCACCGACT TCGCGCCGCG GCCGCGACGC CGCACTCTCC
GGCGTCCGTC CCGATAGCAG CGATGACCAG ACCTCAGCCC TGCAGCGCGC GATCGACGAT
GCCGCCGAGC GGCACGTGCC GCTGGCACTG CCGCCCGGCA ACTATCGCAC CGGCACACTG
CGACTCCCGT CCGGCACGCA GCTGTCCGGT GTGCGCGGCG CTACGCGGCT GATCTTCACC
GGCGGGCCAT CGCTATTCGA CAGTCAGGGC GCCGAAACGG CGACGCTGTC CGGCCTCGTG
CTCGACGGCG CCGGCATTCC GCTGCCGAGC CGACGCGGAC TGGTGCATTG CATCGCCGCA
CAGGACCTGC GGATCGAGAA TTGCATGATC ACCGCCAGCG GCGGCTCAGG CATCTGGCTG
GAGGCCAGCT CCGGCGCGAT CAGCAACAAC ATGCTGACCA AGATTGCGGT GACTGGCGTC
GTATCGTTCG ACGCCAAGGG GCTGCGCGTC GACGGCAACA CCATCATTGA TACCAACGAC
AACGGAATCG AGATTCTGCG CACCTCGATC GGCGACGACG GCACGCTCGT CACCGGCAAC
CGGATCGAGA ACATCAAGGC CGGTCCGGGC GGCTCGGGCC AGTACGGCAA CGCCATCAAC
GCGTTTCGCG CCGGCAACGT GGTGATCAGC GGCAACCGCA TCAAGGATTG CGATTACTCG
GCAGTCCGCG GCAACTCGGC CTCGAACATT CAGATCACCG GCAACAGCGT GTTGAACGTG
CGCGAGGTCG CGCTGTATTC GGAATTCGCC TTCGAAGGCG CGGTGATCAA TAACAACACC
GTCGACGGTG CCGCGCTCGG CGTCTCGGTG TGCAATTTCA ATGAGGGCGG CCGGCTCAGC
ACGGTGCAGG GCAACATCAT CCGCAACCTC AAGCCGAAGC GCCCGATCGG CACTGCGCCC
GACGACGATG CCGGGATCGG GATCTATGTC GAAGCCGACA CCGCGGTTTC GGGAAACGTG
ATCGAGAATG CGCCGTCATT CGGCATCGTT GCCGGCTGGG GCCGCTATCT GCGCGACGTC
GCGATCACGG GCAATGTCGT GCGCAAGAGC TTCATCGGCA TCGGCGTGTC GGTGGTGGAC
GGCGCCGGCA CCGCCACGAT CAGCGGCAAC GTCATCGCCG AAACCCCGCG CGGCGCGGTG
GTCGGTCTCG ACCACGCCAG ACCAGTGACG CCGGACCTGA CGACGCCGGG CTCGACGCGG
TTCAACCAGG TCTCGCTCGG CCACAATACC ACCCGGTGA
|
|---|
| Protein sequence | MALHRRDFLT ALATGSALTL TASPLTAAPT SRRGRDAALS GVRPDSSDDQ TSALQRAIDD
AAERHVPLAL PPGNYRTGTL RLPSGTQLSG VRGATRLIFT GGPSLFDSQG AETATLSGLV
LDGAGIPLPS RRGLVHCIAA QDLRIENCMI TASGGSGIWL EASSGAISNN MLTKIAVTGV
VSFDAKGLRV DGNTIIDTND NGIEILRTSI GDDGTLVTGN RIENIKAGPG GSGQYGNAIN
AFRAGNVVIS GNRIKDCDYS AVRGNSASNI QITGNSVLNV REVALYSEFA FEGAVINNNT
VDGAALGVSV CNFNEGGRLS TVQGNIIRNL KPKRPIGTAP DDDAGIGIYV EADTAVSGNV
IENAPSFGIV AGWGRYLRDV AITGNVVRKS FIGIGVSVVD GAGTATISGN VIAETPRGAV
VGLDHARPVT PDLTTPGSTR FNQVSLGHNT TR
|
|---|
| |