| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2021 |
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| Symbol | |
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| ID | 6409681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 2192773 |
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| End bp | 2193918 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642711907 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001991019 |
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| Protein GI | 192290414 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGACCAA CTGCCGCGCT GTCGGGCACC CTGCCCGATC CTCAAACCAG GGCCGAAGAC
GCGCGCACCC TTGCCGTCCG CGGCCGGCGG ATGCGTCAGC GCCGGCACAT GCTGGACCTG
ATCGCCGCCA GCTTCATGAT CGATGCCGCG ATCCTGCTGA TCTACGTCCA AGCCGGGACA
ATCCCGTCGA TGGTGGTGGT GGCGTTCGCC GTCTCCGGCG CCCTGGTCGG TGGCATCCTG
TTCGCTCTGT CGGAATCCGG ATTCAACGAT CGCTTCTCCG ATCACTATCT GACGGTGCCG
ATCGCGATCA CGACGCTGGC ACTGATCATC GCCTTCACGG TATGGGCGCC GCAGATCGGG
GCGTTCTTCC TGTTCGAACT GTTCGTCGTG TTCGGCTTCG CGTCGCTGCG CGCCGACCGT
CGGCAGGCGC TGATCCTCTG GTCCGTGCTG CTGTGCGTGC TGGTGCCGCT GTTCCTGCTC
ACCGATCTGC CGATCGGGAT GCCGCACGAC AATTCGCTCG AACGCCTCGC CACCCTGCTG
GCGCTGGTGC TGACGGTCGG ACGCTGCACC TTCATCGGGG TGTTTTCGAA AGCCTTGCGC
GATTCGCTGT ACAAGCGCGG AGTCCAGCTG CGCGAAGCCT ATCAGCGGAT CGAGGAACTG
GCCGAACTCG ACGAACTGAC CGGGGCCTAT AACCGCCGCT GTATCATGCG GCACCTGGAC
AATGAGATCG AACGCGCGGC GCGGCACTGC GAGTCGCTGT CGCTGGCGTT GATCGACCTC
GACTGGTTCA AGCGCATCAA TGATACCTTT GGCCATCCGA TCGGCGACGA GGTGCTGCGC
ACCTTCGCTA TCACCATCTT CGCCAACATC CGCAGCTTCG ACCGGTTCGG CCGCTACGGC
GGCGAAGAAT TCCTGCTGCT GCTGCCGAAC ACATCCGACG ACGAAGCCCG CCTGATCCTC
GACCGGCTTC GCATGATCGT CGCCGATCTC GACTGGAGCG CGTTCTCGCC CAGCATGATG
GTGACGCTGT CCGCCGGCGT CACCACCATG ACGCTCCAAG AATCCACCGA AGCCGTGCTG
GCACGGGCCG ATCGCGCGCT CTACGAGGCC AAGCACGGCG GACGAAACCG AATTTCCTGC
GCCTGA
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| Protein sequence | MGPTAALSGT LPDPQTRAED ARTLAVRGRR MRQRRHMLDL IAASFMIDAA ILLIYVQAGT
IPSMVVVAFA VSGALVGGIL FALSESGFND RFSDHYLTVP IAITTLALII AFTVWAPQIG
AFFLFELFVV FGFASLRADR RQALILWSVL LCVLVPLFLL TDLPIGMPHD NSLERLATLL
ALVLTVGRCT FIGVFSKALR DSLYKRGVQL REAYQRIEEL AELDELTGAY NRRCIMRHLD
NEIERAARHC ESLSLALIDL DWFKRINDTF GHPIGDEVLR TFAITIFANI RSFDRFGRYG
GEEFLLLLPN TSDDEARLIL DRLRMIVADL DWSAFSPSMM VTLSAGVTTM TLQESTEAVL
ARADRALYEA KHGGRNRISC A
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