| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2009 |
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| Symbol | |
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| ID | 6409669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2177447 |
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| End bp | 2178844 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642711895 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_001991007 |
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| Protein GI | 192290402 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.408823 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATCTC CCCGTGATCT GCTTGCTGAT CTCTGGACCT CCGTCGGCGC TGATGCTGCC
GCGCTGAATC GCGTGACACT CACCGGCAAC GAGCCGCAAC TGCCATCGTC GTTTCGCGTC
GACGCCGCGG CGCAGGTGGC GATTGCGGCG AGCGGGCTGG CGGCAGCGGA GATCTGGAAG
ATGCGGAGCG GGCAGGCGCA GGACGTCAGC GTCGACATCC GCCACGCCGC GATCGAGTGC
CGCTCCGAGC GCTACTTGCG CAGCAACGAC GAACCGCCGC CGCCCGCTTG GGATCCGCTC
GCGGGCGTGT ATCAGGTAAA GGGCGGCCGT TACGTCCGGC TGCACACCAA CTTTCCGCAT
CACCGCGACG CCGTCTGCCG GGTGCTCGGC TGTGAGCCGG TTCGCGACGC GGTGCAGGCA
GCGCTGTTGC AGTGGGAGGG CGAAGCGTTC GAGACCGCCG CCTATGCGGC CGGCGGCGTG
GTGGCGCTGA TGCGGTCGCG CGAGGAATGG CAGGCGCTGC CGCAGGCTGC CGCGCTCGAT
GCGTTGCCGC TCGTCGAAAT CACCAAAATC GGCGAGGGGG CGCCGAAGCC GTGGCCGGAA
GGCAGCCGAC CGCTCGTGGG CCTGCGCGTG CTGGATCTGT CGCGGGTGAT CGCCGGCCCG
GTCGCCGGCC GGACGCTGGC GGCGCATGGC GCCGACGTGA TGCTGGTGTC GAGCCCCCGG
TTGCCGTCTA TCCCCTGGCT GGTGATCGAC ACCGGTCGTG GCAAGCTGTC GAGCTTCGCC
GACCTGACCA CGCAGGAGGG CCACGCCGCG CTGCGCGAGC TGCTCACCGA AGCGGACATC
TTGAGCCAGG GCTATCGCCC GCGCTCGCTC GCCGCGCTCG GCTTCTCGCC CGAAGAGGCG
GCCACGATCA ATCCCGGCAT CGTTTACGTG TCGCTGTCCG CCTATGGACG CTCGGGTCCG
TGGGCGGAGC GGCGCGGGTT CGACTCCTTG GTGCAGTGCG CCACCGGCTT CAACCACGCC
GAAGGGCAGG CGGCCGGTGT CGCCGGGCCG AAGGAATTGC CGATGCAGAT CCTCGACCAC
GCCACCGGCT ACCTGATGGC GTTCGGTGCG ATGATCGCCA AGGCCCGCCA GGCGCGCGAG
GGCGGCAGCT GGCACGTCCA GGTGTCGCTG GCCCGCACCG GCAAATGGCT GTGGGAAATG
GGGCGGCTGC CGCACGGTCT CGCCACGCCG GATATCGGCC AGGAGGCGGC GGCCCCTTAT
CTTGAACGTG CCGAATCCGG CTTCGGGACG TTGCAGGCGG TCCGGCATTC CGCGGTTCTC
AGCGCCACGC CGGCCTCCTG GGCCCGCCCT GCGGTGCCGC TGGGGACCGA TCCGGCGGCC
TGGCCGGCGC GTGGTTAA
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| Protein sequence | MQSPRDLLAD LWTSVGADAA ALNRVTLTGN EPQLPSSFRV DAAAQVAIAA SGLAAAEIWK
MRSGQAQDVS VDIRHAAIEC RSERYLRSND EPPPPAWDPL AGVYQVKGGR YVRLHTNFPH
HRDAVCRVLG CEPVRDAVQA ALLQWEGEAF ETAAYAAGGV VALMRSREEW QALPQAAALD
ALPLVEITKI GEGAPKPWPE GSRPLVGLRV LDLSRVIAGP VAGRTLAAHG ADVMLVSSPR
LPSIPWLVID TGRGKLSSFA DLTTQEGHAA LRELLTEADI LSQGYRPRSL AALGFSPEEA
ATINPGIVYV SLSAYGRSGP WAERRGFDSL VQCATGFNHA EGQAAGVAGP KELPMQILDH
ATGYLMAFGA MIAKARQARE GGSWHVQVSL ARTGKWLWEM GRLPHGLATP DIGQEAAAPY
LERAESGFGT LQAVRHSAVL SATPASWARP AVPLGTDPAA WPARG
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