| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1934 |
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| Symbol | |
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| ID | 6409594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 2085151 |
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| End bp | 2086584 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642711820 |
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| Product | Amidase |
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| Protein accession | YP_001990932 |
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| Protein GI | 192290327 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000185189 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCGGCAG ATCAGGCGCT GGTAAAGGAA ACCGCTTGTG CAGTGGTGGG CAAGCTCAAG
TCCGGCGAGG TGACGCCGAT CGAGGTGCTC GACGTGCTCG AAGAGCGGAT TGCCGAAGTC
GACGGCGCCA TCAATGCTCT CCCCACTCTG TGCTTCGATC GTGCCCGCAC CCACGCCGCC
GAGCTGATGA AGAAACCGCC GGCCGAGCGC GGCCTTCTGG CCGGTCTGCC GGTGCCGATC
AAGGATCTCA CCGCGGTCGC AGGCGTGCTC ACCACCCAGG GCTCGCCGAT CTACAAGGAC
AACGTCCCGG CGCGCTCCGA CCTGATGGTC GAACATCTCG AAGCCAATGG CGGCGTGGTG
TACGCCAAGT CGAACACCCC GGAATTCGGC GCCGGCGCCA ATACGTTCAA CGAAGTGTTC
GGCGCGACCC GCAACCCGTG GGACCTATCG CGCTCGGCGG CGGGCTCGTC CGGCGGCGCC
GCGGCGGCGC TTGCATCGGG CACCGCATGG CTGGCCCACG GCTCGGACAT GGGCGGCTCG
CTGCGCAATC CGGCGAGCTT CTGCGGCATC GTCGGTCTCC GTCCCAGCTT CGGCCGGGTG
GCGCATACGC CGGCGGCGAA GATAGACCGC AATCTCGGCG TTCAGGGCCC GATGGCCCGC
AATGTCGAGG ACGTCGCGCT GTTGCTCGAC GCGATGAGCG GCGAATACGC CGCCGACCCG
CTGTCGATCC CCTCGCCTGC CACCTCGTTC CTCGCGGCGG CGCGGTCGCG GCAGAAGCCG
CTGCGCGTGG CCTATTCGCC CGATCTCGGC ATCACTCCGG TCGATCCGGA AGTCGCCGCC
GTCACCCGCA AGGCGGCCGA ACGCTTCGCC GAGGCCGGCG TGATCGTGGA ACAGGCGCAG
CCTGATCTGT CCGAAGCGCA CGAGTGCTTC CAGGCGCTGC GCGCGTTCGA CTTCGCGATC
AGCAAGGCCG ATCTGCTGCG CACCAAGCGC GACCTGCTCA AACCGGAAGT GATCTGGAAT
ATCGAACAGG GCCTCAAGCT CAGCGTCGAC GATCTGGCCA AGGCCGAAGC GCAGCGGGTG
GCGATGACGG CGCGGACCAT CGAGTTCTTC CGGACCTACG ATCTGCTGCT GTGCCCAGCG
ACGATCACCG CGCCGTTCCC GGTCGAGCAG CGCTACCTCG CCGAATGCAA CGGTCATACC
TTCGACAACT ACGTCGAATG GCTCGGCATC GTCTACGCGA TCACGCTGGT GTGCTGCCCT
GCCCTGTCGC TGCCTTGCGG CATCACCACG ACCGGCCTGC CTGTCGGCCT GCAGATGGTG
GCACGGCCGC GCAACGAAGC CGGCCTGCTC GCCGGCGCCG CGGTGCTCGA GGATATCCTT
GGCCTGAAGG GCACGACCCC GATCGACCCG CGTCCGGCGC CCGCCAGCCT GTAG
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| Protein sequence | MAADQALVKE TACAVVGKLK SGEVTPIEVL DVLEERIAEV DGAINALPTL CFDRARTHAA
ELMKKPPAER GLLAGLPVPI KDLTAVAGVL TTQGSPIYKD NVPARSDLMV EHLEANGGVV
YAKSNTPEFG AGANTFNEVF GATRNPWDLS RSAAGSSGGA AAALASGTAW LAHGSDMGGS
LRNPASFCGI VGLRPSFGRV AHTPAAKIDR NLGVQGPMAR NVEDVALLLD AMSGEYAADP
LSIPSPATSF LAAARSRQKP LRVAYSPDLG ITPVDPEVAA VTRKAAERFA EAGVIVEQAQ
PDLSEAHECF QALRAFDFAI SKADLLRTKR DLLKPEVIWN IEQGLKLSVD DLAKAEAQRV
AMTARTIEFF RTYDLLLCPA TITAPFPVEQ RYLAECNGHT FDNYVEWLGI VYAITLVCCP
ALSLPCGITT TGLPVGLQMV ARPRNEAGLL AGAAVLEDIL GLKGTTPIDP RPAPASL
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