Gene Rpal_1883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1883 
Symbol 
ID6409542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp2030922 
End bp2032355 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content66% 
IMG OID642711771 
ProductAldehyde Dehydrogenase 
Protein accessionYP_001990884 
Protein GI192290279 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACCAGC CAATCGGCGG TTTCGGGGGC AATGCGCTCC ACGACAGCTT TCATCGCATG 
TTCGAGATCT CGCGCGCCGA ACCGCCGCCG ACGCTGGAGC AGCGTCAGGA CCGGCTCGCC
AGGCTGCGCG CGCTGATCAA GGACAACGAA AAACGATTCG AGCAGGCGAT CTCCGCCGAT
TTCGGTCACC GCAGCTCGAC CGAGACGCTG ATCGCCGAGA CGCTCAGCCT GCTCGGCGAC
ATCAAGCATA CCTCGCGGCA TCTCAAGCGC TGGATGGCGC CGCGCAAGGT GTCGACCCAG
CTCCAGTTCC TGCCGGGCAA GAACCGGCTG CTGCCGCAAC CGCTCGGCGT GGTCGGGGTG
ATTGCGCCGT GGAATTATCC GCTGCAGCTC ACCGTCGCGC CTGCGATCGG CGCGATCGCC
GCCGGCAACC GGGTGATGAT CAAGCCGAGC GAATTGTCGC CGCACTTTGC CGCACTGCTG
CAGGAGACGG TCGCGGCCAA GTTCGATGCC AGCGAGATGA TGGTGACCGG GATCGAGGCC
GGCGTCGCCG AGGCCTTCGC GCGACTGCCG TTCGACCACC TGATGTTCAC CGGCTCGACC
CGCGTCGGCC GCATCGTCGC CGCTGAAGCT GGAAAGAACC TCACCCCGGT CACACTCGAA
CTCGGCGGCA AATCGCCGAC CATCGTCGAC CGGTCGGCCG ATCTCGACGA GGTGGCACCG
CGGATCGCCT ACGCCAAGCT GATGAACGCC GGCCAGACCT GCATCGCGCC CGACTACGTG
CTGGCCCCGC AGGACAGAGT CGAAGCCCTC GCCGGCAAGA TCTGGGGCGC GATGCAACAG
ATGTGGGGCA CCGACCCGGC CAATCCGGAC TACACCTCGA TCATCGCCGA GCATCACTAC
GCGCGGCTGA AGAGCCTGGT CGACGATGCT GTCGCACGCG GCGCGCGGCT GCTGCAGCCC
GCCTCGGCCG ACGATGCCGC GTGGGCGGGC AAGCGCAAAT TCCCGCCGAC CCTCGTGCTC
GGCGCAACGC ACGAGATGAA GATCATGCAG GAGGAGATCT TCGGTCCGCT GCTGCCGATC
CTCGGTTACA GCGAGCCGAC CGAGCCGATC AATTTCATCA ACGGACGTGA CCGCCCGCTG
GCGCTGTATT GGTTCGGCAC CGACGACACC GCGCGCGACC AGGTGCTGGA GCGGACCGTC
TCGGGCGGCG TCACCATCAA CGATTGCCTG GTGCATTTCG CCCAGGCCAA CCAGCCGATG
GGCGGCGTCG GTGCCTCGGG CACCGGCGCG TATCACGGCG AATGGGGCTT CAACACCTTC
ACCAAGATGA AGCCGATCTT CTATCGCTCG CCCTACAACC GGTTCGCCGA TCTGTACCCG
CCCTACGGCG CCAAGATCGC GCGGCTGTCG AAGGTGCTGC GCCTGATGTC GTAA
 
Protein sequence
MDQPIGGFGG NALHDSFHRM FEISRAEPPP TLEQRQDRLA RLRALIKDNE KRFEQAISAD 
FGHRSSTETL IAETLSLLGD IKHTSRHLKR WMAPRKVSTQ LQFLPGKNRL LPQPLGVVGV
IAPWNYPLQL TVAPAIGAIA AGNRVMIKPS ELSPHFAALL QETVAAKFDA SEMMVTGIEA
GVAEAFARLP FDHLMFTGST RVGRIVAAEA GKNLTPVTLE LGGKSPTIVD RSADLDEVAP
RIAYAKLMNA GQTCIAPDYV LAPQDRVEAL AGKIWGAMQQ MWGTDPANPD YTSIIAEHHY
ARLKSLVDDA VARGARLLQP ASADDAAWAG KRKFPPTLVL GATHEMKIMQ EEIFGPLLPI
LGYSEPTEPI NFINGRDRPL ALYWFGTDDT ARDQVLERTV SGGVTINDCL VHFAQANQPM
GGVGASGTGA YHGEWGFNTF TKMKPIFYRS PYNRFADLYP PYGAKIARLS KVLRLMS