| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1869 |
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| Symbol | |
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| ID | 6409528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2006587 |
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| End bp | 2008938 |
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| Gene Length | 2352 bp |
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| Protein Length | 783 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642711757 |
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| Product | putative phosphoketolase |
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| Protein accession | YP_001990870 |
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| Protein GI | 192290265 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3957] Phosphoketolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGACG TGTTGTCCAA CGATCTGTTG CAGAAGATGG ACGCCTATTG GCGCGCCGCG
AACTACCTGT CTGTCGGACA GATCTATCTG CAGGACAATC CGCTACTCGA TCAGAAGCTG
CAACTCGACC ACATCAAGCC GCGCCTGCTT GGCCACTGGG GTACGACCCC CGGCCTCAAT
CTTCTCTACG TGCATCTCAA CCGGCTGATC ACCGAGCATG ATCTCGATAT GATCTACATT
ACCGGTCCCG GCCATGGCGG GCCCGGCCTG GTTGCCAACG CGTATCTGGA AGGCACCTAC
ACCGAGCGCT ATCCGGCGAT CGAGCGCAGC CGCAACGGCA TGCAGCGGCT GTTCCGACAA
TTCTCGTGGC CGCACGGCGT GCCGAGCCAC GTCTCGCCGG AAACGCCCGG CTCGATCCAC
GAGGGCGGCG AACTCGGCTA CTCGCTGGCG CATGCCTATG GCGCGGCGTT CGACAATCCG
AATCTGATCG TCGCTTGCGT GGTCGGCGAC GGCGAGGCCG AGACCGGCGC TCTGGCGACG
AGTTGGCACT CCAACAAGTT TCTCAATCCC GCGCGCGACG GCGCGGTGTT GCCGATCCTG
CATCTGAACG GCTTCAAGAT CGCCAACCCG ACCGTGCTGG CGCGGATCAC GCCGCAGGAA
CTCACCGACC TGATGCGCGG CTATGGCTAT GAGCCGCACT TCGTCGAAGG CGACGATCCG
GCGGTGGTGC ACCAGACGCT GGCTGCGACG CTGGAACGCG TGCTCGGCGA GATCCGGGCC
ATTCAGGACA AGGCTCGCAA CCACGGCGAC ACCGAGCGGC CGCGCTGGCC GATGATCGTG
ATGCGGACCC CAAAGGGGTG GACCGGCCCC AAGCAGGTCG ACGGCAAGCC GGTGGAGGGC
ACCTGGCGCG CCCATCAGGT GCCGATCGCG GACTTCAAGA ACCCCGAGCA TCTGACGCTG
CTCGAAGATT GGATGCGCAG CTATCGGCCC GATGAGCTGT TCGACGCCAC CGGCAAGCTG
CGCGACGAGC TGCAGGCGCT GGCGCCGACC GGCCGTCGCC GGATGAGCGC CAATCCGCAC
GCCAATGGCG GCGAATTGCT GGAGCCGCTG TCGCTGCCCG ATTTCCACGA CTATGCGGTG
ACGCTCACCG GGCCCGGCGC GCTGAAGGCC GAGGCGACGC GGGTGCTCGG CACGTTCCTG
CGCGACGTGA TGAAGAACAG CCTCGAGAGC GAAAACTTCC GCTTGTTCGG CCCGGACGAA
ACCGCCTCGA ACCGGCTCGA TGCGGTGCTG CAAGTCTCGC CGAAGGAGTG GATGGCGGCG
ATCGAGGATG TCGACGTCGA TCTCAGTCCG GACGGCCGGG TGATGGAGGT GCTCAGCGAG
CATCTATGCC AAGGCTGGCT CGAAGGCTAT CTGCTGACCG GCCGCCACGG CTTCTTCTCG
TGCTACGAGG CGTTCATCCA CATCATCGAC TCGATGTTCA ATCAGCACGC CAAATGGCTA
AAGGCGTGCG CCACGATTCC GTGGCGGAAG CCGATCGCGT CGCTGAACTA TCTGCTGACC
TCGCACGTCT GGCGCCAAGA TCACAACGGG TTCTCGCACC AGGATCCCGG CTTCATCGAC
CACGTCGCCA ACAAGAAGTC GAATGTGGTG CGGATCTATC TGCCGCCGGA TGCCAACTGT
CTGCTGTCGG TGGCCGACCA CTGCCTGCGC AGCCGCAACT ACGTCAACCT GATCGTCGCC
GGCAAGCAGC CGGAATGGCA GTGGCTCGAT ATCGACGCCG CCGTCCGTCA CTGCACCACA
GGCGCCGGGA TCTGGCATTG GGCGAGCGAC GAGGGTGAGC CCGACGTGGT GATGGCCTGC
GCCGGCGACG TGCCGACGGT CGAGACGCTG GCGGCGGTCA AGCTGCTGCG GGAGTACGTG
CCGGACATCA AGATCCGTGT CGTCAACGTG GTCGACCTGA TGGTGCTGCA GCCGAGCTCC
GAGCATCCGC ACGGCCTGGA CGACCGCCGC TTCGACGAGC TGTTCACCAC CGACAAGCCG
GTGATCTTCG CCTTCCACGG CTATCCGTGG CTGATCCACC GGCTGACCTA TCGCCGCCGC
AACCACGTCA ACATCCACGT CCGCGGCTAC AAGGAAGAGG GCACCACCAC CACGCCGTTC
GACATGGTGG TGCTGAACGA TCTCGACCGT TATCGCCTGG CACTCGACGC CATCCTGCGG
ATTCCGCGGC TCGCCGATCA GCGCGATGCC GCCACCTCGC GCTACTGGGC GACGATGCAG
CGGCACAAGC TGTATATCGG CGAACACGGC GACGATCTGC CAGAGGTTCG CGACTGGCGC
TGGTCGGCCT GA
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| Protein sequence | MPDVLSNDLL QKMDAYWRAA NYLSVGQIYL QDNPLLDQKL QLDHIKPRLL GHWGTTPGLN
LLYVHLNRLI TEHDLDMIYI TGPGHGGPGL VANAYLEGTY TERYPAIERS RNGMQRLFRQ
FSWPHGVPSH VSPETPGSIH EGGELGYSLA HAYGAAFDNP NLIVACVVGD GEAETGALAT
SWHSNKFLNP ARDGAVLPIL HLNGFKIANP TVLARITPQE LTDLMRGYGY EPHFVEGDDP
AVVHQTLAAT LERVLGEIRA IQDKARNHGD TERPRWPMIV MRTPKGWTGP KQVDGKPVEG
TWRAHQVPIA DFKNPEHLTL LEDWMRSYRP DELFDATGKL RDELQALAPT GRRRMSANPH
ANGGELLEPL SLPDFHDYAV TLTGPGALKA EATRVLGTFL RDVMKNSLES ENFRLFGPDE
TASNRLDAVL QVSPKEWMAA IEDVDVDLSP DGRVMEVLSE HLCQGWLEGY LLTGRHGFFS
CYEAFIHIID SMFNQHAKWL KACATIPWRK PIASLNYLLT SHVWRQDHNG FSHQDPGFID
HVANKKSNVV RIYLPPDANC LLSVADHCLR SRNYVNLIVA GKQPEWQWLD IDAAVRHCTT
GAGIWHWASD EGEPDVVMAC AGDVPTVETL AAVKLLREYV PDIKIRVVNV VDLMVLQPSS
EHPHGLDDRR FDELFTTDKP VIFAFHGYPW LIHRLTYRRR NHVNIHVRGY KEEGTTTTPF
DMVVLNDLDR YRLALDAILR IPRLADQRDA ATSRYWATMQ RHKLYIGEHG DDLPEVRDWR
WSA
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