Gene Rpal_1834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1834 
Symbol 
ID6409493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp1971681 
End bp1972547 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content66% 
IMG OID642711722 
Productiron permease FTR1 
Protein accessionYP_001990835 
Protein GI192290230 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0672] High-affinity Fe2+/Pb2+ permease 
TIGRFAM ID[TIGR00145] FTR1 family protein 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.163431 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGGGT CGCAGTTCGG CAACGTGGTC ATTGTGGTCT GGCGCGAGGG CGTCGAGGCG 
CTGCTGATCG TCGGCATCCT CAATGCCTGG CTGCGGAATA ACGACGCCAG CAGGATTGGT
CGGCGCTATC TGTGGGCGGG CGCGGCCGCC GGACTGCTGA TCGCGTGCGG TTTCGGCACC
ACCATCGCAC TGTCAAGCAG CACGATTCCG GTGACCAGCC GAGAAATCTA TGAAGCGATC
GCCACCCTGC TCGCCGCCGG CCTGATCGTC CACATGGTGG CCTGGATGCG CGGCCAGGGC
CGCACGTTGC GCGACGAACT CGAAGCGGCA CTGCGACAGG AAACCATCAC CGCGAGTTGG
TGGGGCGTCT TTACGCTGGC GGCCCTGGCG ATCGCGCGCG AGGGCGCCGA AACGATCCTG
TTCCTGCTCG GCGCGCTGTC GGCAAGCGAA AGCGCATCCC CGGCCGAGCC GATCCTGGGC
GGCATCGCCG GCGTCGGCCT TGCGCTCGCG ACCTACGCAC TACTGCAATT CGGCAGCTGG
ATCGTAACCT GGCGGCTGTT CTTTCGCGTC ACCGAAGTGA TGATGTTGCT GCTTGCCGCC
TCGCTGTTGA TGAGCGGGGT GGATACCTTG AGCAAGCTCG GCATGCTGCC GTCGACCGCG
CGGCTGTGGG ACAGTTCGGC GATGCTGTCG GACCACGGGC CGATCGGCGC CCTGGTGGCG
GGCCTCACCG GCTATCGGTC GCAGCCGACC CTGCTCGAGC TCGGCTTCTA CGCGGCGTAT
TGGATCTGCG TCGTTCTACT GCTGCGCAAG ACGACGGCGC CCGAACAGGT CGTCGTCGCC
GAGAACCGCG CCGAAATTCA GCGCTGA
 
Protein sequence
MIGSQFGNVV IVVWREGVEA LLIVGILNAW LRNNDASRIG RRYLWAGAAA GLLIACGFGT 
TIALSSSTIP VTSREIYEAI ATLLAAGLIV HMVAWMRGQG RTLRDELEAA LRQETITASW
WGVFTLAALA IAREGAETIL FLLGALSASE SASPAEPILG GIAGVGLALA TYALLQFGSW
IVTWRLFFRV TEVMMLLLAA SLLMSGVDTL SKLGMLPSTA RLWDSSAMLS DHGPIGALVA
GLTGYRSQPT LLELGFYAAY WICVVLLLRK TTAPEQVVVA ENRAEIQR