Gene Rpal_1813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1813 
Symbol 
ID6409471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp1947800 
End bp1948393 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content68% 
IMG OID642711700 
Producthypothetical protein 
Protein accessionYP_001990814 
Protein GI192290209 
COG category[S] Function unknown 
COG ID[COG5400] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.768116 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTTCG TGACGCGTCG CGCCGCGCTG GCCTTTGTTG CGCTGGCCGC CCTGCATCTG 
CCGGCTGCGG CCCAGCAGCA GCCGTTGCCG CCGAAGTCGC AGGCCGGCCC GAACACCTAT 
GGGCCGGACG AACTGGTCGG CGCCGGCCAC CGCTTCTTCG GCAACGTCTC GCGCGGCCTC 
GCCTCGGTGA TCGAGCGCGC GGTCAGCCAA TGGGGCCTGC CCAATGGCTA TGTGCTCGGC 
GAGGAAGGCT CGGGCGCCTT CGTCGCCGGC CTGCGCTACG GCGAAGGTAC GCTCTACACC 
AAGAACGCTG GCGATCTGAA AGTGTACTGG CAGGGGCCGT CGGTTGGCTT CGACTGGGGC 
GGCAACGGCG CCCGCACCAT GACGCTGGTG TATAACCTGC CCTCCACCAA CGCGATCTAT 
CAGCGGTTCG GCGGCATCGA CGGCTCGGCC TATGTGGTCG GCGGCTTCGG CATGACCGCG 
CTGACCGCCA ACGGCATCGT GCTGGTGCCG ATCCAGTCCG GCATCGGGCT GCGGCTGGGC 
GCCAATATCG GCTACCTGAA GTTCACCCCC TCGGCGACCT GGAATCCGTT CTGA
 
Protein sequence
MSFVTRRAAL AFVALAALHL PAAAQQQPLP PKSQAGPNTY GPDELVGAGH RFFGNVSRGL 
ASVIERAVSQ WGLPNGYVLG EEGSGAFVAG LRYGEGTLYT KNAGDLKVYW QGPSVGFDWG 
GNGARTMTLV YNLPSTNAIY QRFGGIDGSA YVVGGFGMTA LTANGIVLVP IQSGIGLRLG 
ANIGYLKFTP SATWNPF