Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1731 |
Symbol | |
ID | 6409388 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 1854785 |
End bp | 1856407 |
Gene Length | 1623 bp |
Protein Length | 540 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642711619 |
Product | light-independent protochlorophyllide reductase subunit B |
Protein accession | YP_001990734 |
Protein GI | 192290129 |
COG category | [C] Energy production and conversion |
COG ID | [COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains |
TIGRFAM ID | [TIGR01278] light-independent protochlorophyllide reductase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGCTCA CCGTATGGAC CTATGAAGGC CCTCCCCATG TCGGCGCGAT GCGCGTTGCC ACGGGTATGG AGAAATTGCA CTACGTGCTG CACGCTCCGC AGGGCGACAC CTACGCCGAT CTGTTGTTCA CGATGATCGA GCGCCGCAAC AAGCGGCCGC CGGTGACCTA CACGACGTTC GCCGCGCGCG ATCTCGGCAA GGACACCGCC GAGCTGTTCA TGAGCGCGGC CCGCAATGCC TATGCGCGCT TCAAGCCGCA GGCGATGATC GTCGGCGCGT CCTGCACCGG CTCGCTGATT CAGGACGATC CGGGCGGGCT CGCCAAGTCG CTCGGGTTCT CGATCCCGGT GATCCCGATC GATCTGCCGG CGTATCAGCG CAAGGAAAAC TGGGGCGCGT CCGAGACGTT CTATCAGCTG GTGCGCGCGA TCGCCGGTCC CAAGGCGCCG GCGCCCGGTA CCAAGCGCCC TGAACGGGCC GCAGGTCAGC GCGCCAAGTG CAATCTGCTC GGGCCGACCG CGCTCGGCTT CCGTCATCGC GACGACATCA CCGAGATCAC CAGGCTGCTC GGCCAGCTCG GCATTGACGT GAACGTGGTG GCGCCGATGG GCGCGACGCC GGCGGATCTG ACCCGTCTCG GCGAGGCCGA CTTCAACGTC GTGCTGTATC CGGAAGTCGC CTCGCAGGCG GCGTCCTGGC TGCAGCGGAT CTTCCATCAG CCGTTCACCA AGACGATTCC GATCGGCGTG TCGGCGACGC GCGAATTCGT GCGCGAAGTC GCGGGCCTTG CCGGCGTCGA TCCGGAGCCG GTGCTGGCTG CGGCCTCGAC CCGGCTGCCG TGGTACTCGC ATTCGGTCGA CTCGACCTAC CTGACCAACA AGCGCGTCTT CATCTTCGGC GATGCCACCC ATGCGATCGC CTCGGCGCGA ATCGCATCGG AGGAGCTTGG CTTCAAGGTG GTCGGGCTCG GCACCTACAG CCGTGAATTC GGCCGCGACG TCCGCGAGGC GGCGGCGAAA TACGGTGTCG AGGCGCTGAT CACCGACGAC TATCTCGAAG TCGAAGCCAA GGTCGCCGAA CTGCATCCGG AGCTGGTGCT CGGGACCCAG ATGGAGCGCC ACATCGCCAA GCGCCTCGGC GTGCCCTGCG CGGTGATCTC GGCGCCGGTG CACGTCCAGG ATTTCCCCGC GCGCTATGCG CCGCAGATGG GATTCGAAGG CGCCAATGTG ATCTTCGACA CCTGGGTCCA TCCGCTGATG ATGGGCCTCG AAGAGCATCT TCTGGCGATG TTCAAGGACG ATTTCGAATT CAAGGACGGC GCGTTGCCGT CACATCTCGG CACCGGCCAC GCACCGGCTT CCGCGCCCGC AGCGGCGGAG GTCGCCGTTG CGCTGCCGCA AAGCGCGCCG GTTCTCGACG GTGCAGCATC TAACCCGGCT CCGGTCGCAA CCGCCCCCAC AGGGGCCGTG TGGGCGCCGG AAGCCGAAAA GGAACTGCTG AAGATACCGT TCTTCGTCCG CGGCAAGGCT CGCCGAAATA CCGAGCGCTT CGCCAACGAA AACGGTGTCG CAACCATTAC TGTCGAGACC TTGTACGATG CCAAAGCGCA CTTCGCCCGC TGA
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Protein sequence | MQLTVWTYEG PPHVGAMRVA TGMEKLHYVL HAPQGDTYAD LLFTMIERRN KRPPVTYTTF AARDLGKDTA ELFMSAARNA YARFKPQAMI VGASCTGSLI QDDPGGLAKS LGFSIPVIPI DLPAYQRKEN WGASETFYQL VRAIAGPKAP APGTKRPERA AGQRAKCNLL GPTALGFRHR DDITEITRLL GQLGIDVNVV APMGATPADL TRLGEADFNV VLYPEVASQA ASWLQRIFHQ PFTKTIPIGV SATREFVREV AGLAGVDPEP VLAAASTRLP WYSHSVDSTY LTNKRVFIFG DATHAIASAR IASEELGFKV VGLGTYSREF GRDVREAAAK YGVEALITDD YLEVEAKVAE LHPELVLGTQ MERHIAKRLG VPCAVISAPV HVQDFPARYA PQMGFEGANV IFDTWVHPLM MGLEEHLLAM FKDDFEFKDG ALPSHLGTGH APASAPAAAE VAVALPQSAP VLDGAASNPA PVATAPTGAV WAPEAEKELL KIPFFVRGKA RRNTERFANE NGVATITVET LYDAKAHFAR
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