| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1676 |
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| Symbol | |
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| ID | 6409333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1795639 |
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| End bp | 1796325 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642711564 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_001990679 |
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| Protein GI | 192290074 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCAA CCGCGATGGA CCAGCAATCC CCTTCCCGAC TGCGGGTGTT TATCGCCGAC
GATCACCCGG TGGTGCTCAG CGGCATGAAG GCGCTGGTCG CAGGCGATCC CGGGCTCGAA
GTGGTGGGCG AGGCCAGCGA CGGTCCGAAC GCCTTGCGCC GCGCCACGGA ATTGAAGCCG
GACGTCGCCG TGCTCGATCT GTCGATGCCC GGCCTCAACG GCATCGAGGT GGCGCGCAAG
TTCCTCGCCG CCTGTCCGGA CTGCCGCGTG CTGGTGCTGA CCGTGCACGA AGACGGCGCT
TACTTGCGGC AATTGCTCGA TCTCGGCGTC GCCGGCTACG TGCTGAAACG CTCCGCCACC
GAAGAACTGA TCCGCGGCAT CCACGCGGTC GGCAGCGGCG GCATCTATCT CGATCCGGCG
ATCGCCGGCC GCGCCATCGG ACGCACCACG CCGCATCTGC ACAATGGCGA CGAGCACAAT
GCGGTGTCGG AACTGTCGAC GCGCGAGATC GAGGTGCTGC GGCTCGCCGC GATCGGCCAT
AGTAATAAGA CCATCGCCGC CAAGCTGCAG ATCGGCGCCA AGAGCGTCGA AACCTACAAG
GCGCGCGGCA TGGCAAAGCT CGGCTTCCAC AATCGCGTCG AGGTGGTGCG GTTCGCACTC
AGCATGGGCT GGCTGTCGGA CCCATAG
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| Protein sequence | MKATAMDQQS PSRLRVFIAD DHPVVLSGMK ALVAGDPGLE VVGEASDGPN ALRRATELKP
DVAVLDLSMP GLNGIEVARK FLAACPDCRV LVLTVHEDGA YLRQLLDLGV AGYVLKRSAT
EELIRGIHAV GSGGIYLDPA IAGRAIGRTT PHLHNGDEHN AVSELSTREI EVLRLAAIGH
SNKTIAAKLQ IGAKSVETYK ARGMAKLGFH NRVEVVRFAL SMGWLSDP
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