Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1673 |
Symbol | |
ID | 6409330 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 1792785 |
End bp | 1794011 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642711561 |
Product | NnrS family protein |
Protein accession | YP_001990676 |
Protein GI | 192290071 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3213] Uncharacterized protein involved in response to NO |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.496066 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAGCA CGACGATCGA ATCTTCCCCA GCCGGCCCCG CCAAGCGCAA GCCGGTGCCG CGCTATCCGT TGCAGAGCCG CTGGACCGTC CTGTCGGCCG GGTTCCGTCC GTTCTTCCTG CTCGGCGCGA TCTTCGCCGC GGTCGCAGTG CTGTTGTGGC TGCCGGTGTA TCACGGCGAG CTGACGCTGC AGACCGCCTT TGTGCCGCGC GACTGGCACG TCCACGAGAT GCTGTACGGC TATTTGCCGG CGGTGATCAC CGGCTTCCTG CTCACTGCGA TTCCAAACTG GACCGGACGC CTGCCGCTGC AGGGCGCGCC GCTGGCGACG CTCGCGGTGG TGTGGCTCGC TGGACGGCTG GCCGTGACGT TCTCGGCCGA CACCGGCTGG CTCGCTGCGT TGCTGATCGA TGCCTGTTTC CTGCTGCTGG TGGCGCTTGC GGCGCTGCGC GAGATCATCT CGGGGCGTAA CTGGCGCAAC CTCAACGTCG TCGCTCTGCT GACGCTGCTG CTGATCGGCA ACGTCGCGTT CCATCTTGAG GCGCATTTCG GCGGCACCGC CGACTACAGC ATCCGCATCG GCATCGCGGT GGTGATCATG CTGATCTCGC TGATCGGCGG CCGCATTACC CCAAGCTTCA CCCGCAACTG GCTGGTGCGC GCAAATCCCG GCCGGCTGCC GCAGCCGTTC AACAAGCTCG ACATGGTGAT CGTTGCGTTC AGCGGCCTGA CGCTGGTGCT GTGGGTTTCG ATGCCGTTCA GCCGGATCAG CGGCTTTGCG CTGCTGATTG CCGGCGTGCT GCATCTCGTC CGGCTGGCGC GCTGGGCCGG CGATCGCACC GTCAAGGAGA AGCTGCTGCT GGTGCTGCAC GTCGGCTATC TGTTCATCCC GCTCGGCTTC CTGCTCACGT CGGCTGCGGC GTTCGGGCTG ATCCCGGTCA GCGCCGGCAT TCACGCCTGG ATGGTTGGCG GCGCCGGTGT GATGACGCTG GCGGTGATGA CCCGCGCCTC GCTCGGCCAC ACCGGCCAGC AACTCACCGC CTCGCTGCCG ACGCAGGGGA TCTATCTGGC GGCACTGTTT GCCGTCACCG CGCGGATCGC GGCGGCGCTG CTGCCGGCCT GGAGCGACCC GCTGCTGCAT CTGGCTGCGC TCAGCTGGGC GGTCGCCTTC CTCGGCTTCG CGCTGAGCTA CGGCCCGACG CTGCTCGTCC GCGGCAAGCC GCACTGA
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Protein sequence | MSSTTIESSP AGPAKRKPVP RYPLQSRWTV LSAGFRPFFL LGAIFAAVAV LLWLPVYHGE LTLQTAFVPR DWHVHEMLYG YLPAVITGFL LTAIPNWTGR LPLQGAPLAT LAVVWLAGRL AVTFSADTGW LAALLIDACF LLLVALAALR EIISGRNWRN LNVVALLTLL LIGNVAFHLE AHFGGTADYS IRIGIAVVIM LISLIGGRIT PSFTRNWLVR ANPGRLPQPF NKLDMVIVAF SGLTLVLWVS MPFSRISGFA LLIAGVLHLV RLARWAGDRT VKEKLLLVLH VGYLFIPLGF LLTSAAAFGL IPVSAGIHAW MVGGAGVMTL AVMTRASLGH TGQQLTASLP TQGIYLAALF AVTARIAAAL LPAWSDPLLH LAALSWAVAF LGFALSYGPT LLVRGKPH
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