Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1647 |
Symbol | |
ID | 6409304 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 1763992 |
End bp | 1765200 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642711536 |
Product | cobalamin synthesis protein P47K |
Protein accession | YP_001990651 |
Protein GI | 192290046 |
COG category | [R] General function prediction only |
COG ID | [COG0523] Putative GTPases (G3E family) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCACC CCCTTCTCCC GGTCACCGTT CTGTCCGGCT TTCTCGGCGC CGGCAAAACC ACCCTTCTCA ACCGGATGCT GTCCAACCGT GAAGGCCGGC GGCTGGCGGT GATCGTCAAT GACATGAGCG AGGTGAACAT TGACGCCGAG CTGGTGCGCC AGGATGGCGG GTTGACGCGG TCGGAGGAAA CATTGGTCGA GATGACCAAT GGCTGCATCT GCTGCACGCT GCGTGAGGAC CTGCTGCTCG AAGTCCGCAA GCTCGCCGAG AGCGGCCGGT TCGACGGGTT GGTGATCGAA TCCACCGGCA TCGCTGAGCC GCTGCCGATC GCCGCGACGT TCGAATTCCG CGACGAGAAC GGCGCCAGTC TGTCCGACAT CGCGCGGCTC GACACCATGG TGACGGTGGT CGATACGGCC AGCCTGCTGG CGAACTACTC CAGCCAGGAA TTCCTGCGCG ACCGCGGCGA AGTCGCCGGC GCCGACGACG AGCGGACACT GGTCGATCTG CTGGTCGAAC AGATCGAATT CGCCGACGTC ATCGTGCTCA ACAAGGTGTC GGCGACCTCG CCGAGCCGGC GCGAAACCGC GCGGTCGATC GTGCGAGCGC TGAACTCGGA TGCCAGGATC ATCGAAGCCG ATTTCGGCGA CGTACCTCTG TCGTCGGTCT TGCACACCGG ACTGTTCGAT TTCGAGCGCG CGCATCAGCA CCCGCTGTGG TTCAAGGAAC TAAACGGCTT CGCCGACCAC GTGCCGGAAA CCGAAGAATA CGGCATCCGC TCATTCGTGT ACCGGGCGCG GCGGCCGTTT CATCCGCTCC GCTTCCAGTC GTTCTGCAAC CGGAGCTGGC CGGGCGTAAT CCGCGCCAAG GGCTTCTTCT GGCTGGCGAC GCGACCGCAG CATGTCGGTG AAATCGCGCA GGCCGGCGCG ATGGTACGCA CCTCCAAGCG CGGACTGTGG TGGTCGGCGG TGCCGAAGAC GCGCTGGCCC GACAACGCCG ACTGGCACGA GGCGATGAAG CCGTATTTCG ATCCGGTGTG GGGCGACCGC CGCCAGGAAA TCGTGTTCAT CGGCACCGGC GAGATGGACG AAGCCGCGCT GCGCCGCCAG CTCGATCTCT GTCTCGTCGG TGAAGATGCG CAGTTCACGC CGGATGCGTG GCAGCAATTG CCCGATCCGT TCCCGAGCTG GGCGCCGGCA CAGAACTGA
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Protein sequence | MDHPLLPVTV LSGFLGAGKT TLLNRMLSNR EGRRLAVIVN DMSEVNIDAE LVRQDGGLTR SEETLVEMTN GCICCTLRED LLLEVRKLAE SGRFDGLVIE STGIAEPLPI AATFEFRDEN GASLSDIARL DTMVTVVDTA SLLANYSSQE FLRDRGEVAG ADDERTLVDL LVEQIEFADV IVLNKVSATS PSRRETARSI VRALNSDARI IEADFGDVPL SSVLHTGLFD FERAHQHPLW FKELNGFADH VPETEEYGIR SFVYRARRPF HPLRFQSFCN RSWPGVIRAK GFFWLATRPQ HVGEIAQAGA MVRTSKRGLW WSAVPKTRWP DNADWHEAMK PYFDPVWGDR RQEIVFIGTG EMDEAALRRQ LDLCLVGEDA QFTPDAWQQL PDPFPSWAPA QN
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