Gene Rpal_1630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1630 
Symbol 
ID6409287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp1744243 
End bp1745244 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content68% 
IMG OID642711519 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_001990634 
Protein GI192290029 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCGGTTG GCGCCGCAGC GCCGCTTCTT GCGGTGCGCG ATCTGTCACT GTCGTTTGCG 
ACCGCCAGCG GTTCATTGCC GATCACGCGC AACGTCGGCT TCTCGATCGC GCCCGGCGAA 
CGTGTCGGGC TGGTCGGCGA GAGCGGCTGC GGCAAGACGG TCACGGGTCT GTCGCTGCTG 
CGATTGTTGC CGGCGCACAA CGCCCAGGTG TGCGGCGAGA TCATGTTCGA CGGCGTTGAT 
CTGTTGAAGC TGTCGCCGCG TCGGATGCGG GCGGTGCGCG GACGCGACAT CGCGATGATT 
TTCCAGGAGC CGATGAGCGC GCTCGATCCG GTGTTCACGG TCGGCGATCA GATCAGCGAA 
GCCTATCGGG TGCATTTCCC GGTCAGCCGT GCCGAAGGCC GCGACCGCGC GATTGAGGCG 
CTGCGCGAGG TCGGCATTCC TGCGCCGGAG CGGCGCTGTG ACGAATATCC GCATCAGCTC 
TCCGGTGGCA TGCGGCAGCG CGTGATGATC GCGATGGCGC TGATCTGCAA ACCGAAATTG 
TTGATTGCGG ACGAGCCGAC CACGGCGCTC GACGTCACCG TGCAGGCGCA GATCACCGAC 
CTGCTGCGAT CGCTGAGCGA GCGCACCGGC ACCGCGCTGA TCTTCATCAC CCATGATCTT 
GGCGTCGTCG CCGAGACCTG CACGCGGATG ATCACGATGT ATGCCGGCGA AGTCGTCGAA 
GATGCGCCGG TCGACGACGT GCTGACGCGG CCGCGCCATC CTTACACCTC GGGCCTGCTG 
CGTTCGCTGC CCGGACTCAG CGCCCGCCGC GGCGTGCTGT CGTCGATCCC CGGCCGGGTG 
CCGTCGCCGA ACGCGATGCC GGCCGGTTGC CGGTTTCGCG CCCGCTGCAC CCATGCGGCG 
GCTGGTTGCG AACGTGAGCA GGCGATGGTC GCAGTCGACG TCGGCCATGC GGCCCGTTGC 
TGGCGCGCGA CCGAGCTGGC CTTGCGGGGA GCCGTGAATT GA
 
Protein sequence
MPVGAAAPLL AVRDLSLSFA TASGSLPITR NVGFSIAPGE RVGLVGESGC GKTVTGLSLL 
RLLPAHNAQV CGEIMFDGVD LLKLSPRRMR AVRGRDIAMI FQEPMSALDP VFTVGDQISE 
AYRVHFPVSR AEGRDRAIEA LREVGIPAPE RRCDEYPHQL SGGMRQRVMI AMALICKPKL 
LIADEPTTAL DVTVQAQITD LLRSLSERTG TALIFITHDL GVVAETCTRM ITMYAGEVVE 
DAPVDDVLTR PRHPYTSGLL RSLPGLSARR GVLSSIPGRV PSPNAMPAGC RFRARCTHAA 
AGCEREQAMV AVDVGHAARC WRATELALRG AVN