| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1612 |
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| Symbol | |
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| ID | 6409269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1726532 |
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| End bp | 1727305 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642711501 |
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| Product | lipoprotein, YaeC family |
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| Protein accession | YP_001990616 |
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| Protein GI | 192290011 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen |
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| TIGRFAM ID | [TIGR00363] lipoprotein, YaeC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCGTC TTGCCGTTTC CCTGATCGCG CTGGCTTTCG CCGGCGCCGC CCATGCCGAG
ACCATCCGCG TCGGCGTCAC CGCCGGCCCG CACGCCGAGA TCCTCGACGT GGTCAAGAAG
GTCGCGGCCG AGCGCGGCCT CGACGTCAAG CCGGTCGAGT TCACCGACTA CGTGGTGCCG
AACCAGGCGC TGGCGCAGAA GGAGCTCGAG GCCAATTCGT TCCAGCATGA GCCGTATCTG
AAGGCGCAGG TCGCCAAGAC CGGCTGGAAG ATCGTCAAGG TCGCCAACAC CATCGCGTCA
CCGCAGGGCG TGTATTCTGT CAAGGTCAAG GCGCTTGCCG ATCTGAAGCA GGGTGCCACC
GTGGCGATCG CCAACGATCC GTCGAACGGC GCGCGCGGCC TGCAAATTCT GGCGCTGCAC
GGCCTGATCA AGCTGAAGGA CGGTGTCGGC GCCACCGCGA CGGTCGCCGA TATCATCGAC
AACCCCAAGA AGCTGAAATT CGTCGAGCTC GACGCCGCCC AGCTGCCGCG CTCGCTGCAG
GATGTCGACC TGGTGTCGAT CAACAACAAC TACGCGGTGC AGGCCGGCCT CGACCCGTCC
AAGGACGCGC TCGCCCGTGA GAACGTCGAA GGCCCCTGGG TCAACATCAT CGCGGTGCGC
GAAGAAGACA AGGACAAGCC CTGGGTCAAG CAGCTGATCG ACGCCTATCA CTCCGACCCG
GTCAAGCAGT TCGTCGAAAC CCGCTTCAAA GGGACTTATA TCCCGGCGTG GTAA
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| Protein sequence | MRRLAVSLIA LAFAGAAHAE TIRVGVTAGP HAEILDVVKK VAAERGLDVK PVEFTDYVVP
NQALAQKELE ANSFQHEPYL KAQVAKTGWK IVKVANTIAS PQGVYSVKVK ALADLKQGAT
VAIANDPSNG ARGLQILALH GLIKLKDGVG ATATVADIID NPKKLKFVEL DAAQLPRSLQ
DVDLVSINNN YAVQAGLDPS KDALARENVE GPWVNIIAVR EEDKDKPWVK QLIDAYHSDP
VKQFVETRFK GTYIPAW
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