Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1573 |
Symbol | |
ID | 6409230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 1682497 |
End bp | 1683306 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642711465 |
Product | ABC transporter related |
Protein accession | YP_001990580 |
Protein GI | 192289975 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGCCG CACCACTGGT GTCGTTCAGA AACGTGCACA AGTACTTCCA GCTCAACGGC GCGCATCTGC ACGCGGTGAA CGGCTTCGAC CTTTCGATCG CCGAAGGCGA GTTCGTCGCC ATTGTCGGCG GCAGCGGCTG CGGGAAATCC ACTCTGCTGC GGCTGCTTGT CGGCCTCGAC CGCGACTATC AGGGCGACAT CCTGATCGAT GGCCTCCCGC TGCCCGGGAT CGGCAGCGAC CGCGGCATCG TGTTCCAGGA GCATCGGCTG TTTCCGTGGC TCACCGTCGA GCAAAACATC GCGCTCGGCG TGATCAATGA TGGCTTGTCG AAGGCCGAGC TCGCTACCTC CCTCGCCGAG CATATCGCAC TGGTTGGACT GCGTGGCTTC GAGAAGGCGC TCCCTCACCA GCTCTCCGGT GGCATGGCGC AGCGGGTCGC GATCGCGCGA GGCCTGGTGG CGAGCCCGCG CATCCTGATG CTGGACGAGC CTTTCGCGGC GCTCGACGCG CTGACGCGGC ATCAGATGGA AGACGAACTG CACCGCATCG GCGCAACCCG CAACGTCACC ACCGTGTTGG TCACCCACGA CGTCGAGGAG GCGATCTATC TGGCCGATCG CGTCGTGGTG ATGACGCCGC GCCCCGGCAC CATCAGGGAG ATCGTCGCCG TCGACCTGCC GAGGCCGCGC GACCGCACCG CCCCAGCGTT CCTCGATTTG CGTAAGTCGA TCCTGCGACT CCTGACGGCC GACGACGCCG GTGTGCACGA CGCACTGCGG GCCAATGCGC CGCTGCCCGT AGCGATCTGA
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Protein sequence | MSAAPLVSFR NVHKYFQLNG AHLHAVNGFD LSIAEGEFVA IVGGSGCGKS TLLRLLVGLD RDYQGDILID GLPLPGIGSD RGIVFQEHRL FPWLTVEQNI ALGVINDGLS KAELATSLAE HIALVGLRGF EKALPHQLSG GMAQRVAIAR GLVASPRILM LDEPFAALDA LTRHQMEDEL HRIGATRNVT TVLVTHDVEE AIYLADRVVV MTPRPGTIRE IVAVDLPRPR DRTAPAFLDL RKSILRLLTA DDAGVHDALR ANAPLPVAI
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