| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1571 |
|---|
| Symbol | |
|---|
| ID | 6409228 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | + |
|---|
| Start bp | 1679823 |
|---|
| End bp | 1680887 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642711463 |
|---|
| Product | putative sulfate ester transporter, periplasmic binding component |
|---|
| Protein accession | YP_001990578 |
|---|
| Protein GI | 192289973 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTGCG CGTTGCGGCT GTCCGCGGTT GTGCTGTTTG TTGGTGCTCT GTGGTCTTCG
GCGTTTGCGG CGGAGCCAGT GACGATCCGC ATCGGCACGC CGGATCAGAG CGCCGGGCCG
ACGCCGTCCG GCGGCATGGG GATCGTCACC TACATCGCCG GCAAGCAGTT ACTCGAGCAG
GAGTTCGCCA AAGACGGCAT CAAAGTCGAA TGGACGTTCT TCAAGGGTGC CGGTCCCGCG
GTCAACGAAG CACTGGCGAA TAAGCAGCTC GATGTCGTCT ATCTTGGCGA CCTCGCCGCG
ATTATCGGCC GCGCCAACGG TCTGGCGACG CGCTTCCTGG TGCCGGTGCG CGGCAACAAT
GCTTACCTCG CGGTACCACT CGACTCCGAC GTCAAGAAGG TCGAGGACCT CAAGGGTAAG
CGTGTCACCG TGTTTAAGGG GACTGCCTAT CAGCTCGTGC TCGATCGGGC GCTGGCCAAA
GCGGGGCTGA GCGAGCGTGA TCTGCAGGTC GTCAACCTGG ATTGGAGCGC GGCGTCGGCT
GCGCTAGCCG CCAAGCAGCT CGACGGCAAC TGGGCCGGCT TGCAGGCGGT GACGCTGCAG
GAAAAGGGGC TGGCGCGGAT CGCGCTGAGC GCTCGCGATC TAGGCCGCGA GTTCACGGTT
CAGAGCGGAT TCCTCGCCCG GGAGGAATTC ATCGCGGCAC ATCCCGATCT CGTCCAACGG
CTCGTCACTG TGGTGGTCAA GGCACAGCGC GATCTGTCGC AGTCGGACCA CCTCGAGGAT
TTCATCATCT TTGCGTCGCA GCGCTCCGGC ATTCCGGCCT CGCTCGGCCG CACCGAATAC
GGCGGAGAGG ATCTGAAGTT TCGGTTCTCG CCGTTGATCG ACGAGTTCGT CATCGACGGG
CTTCGCGTTG GCGTCGAGCA GGCGAAGGAA CTGAACCTGG TCCGAAAGAC TTTCGACGTC
GGCCCGTGGT TTGAGCCGAG GTTCGTCGAC AAGGCGGTCG AAGACCTCGG GCTGAAGAGC
TACTGGCCGC GTTACGACAA ATCCGGGCAG CCGCTGGGGC AATGA
|
|---|
| Protein sequence | MFCALRLSAV VLFVGALWSS AFAAEPVTIR IGTPDQSAGP TPSGGMGIVT YIAGKQLLEQ
EFAKDGIKVE WTFFKGAGPA VNEALANKQL DVVYLGDLAA IIGRANGLAT RFLVPVRGNN
AYLAVPLDSD VKKVEDLKGK RVTVFKGTAY QLVLDRALAK AGLSERDLQV VNLDWSAASA
ALAAKQLDGN WAGLQAVTLQ EKGLARIALS ARDLGREFTV QSGFLAREEF IAAHPDLVQR
LVTVVVKAQR DLSQSDHLED FIIFASQRSG IPASLGRTEY GGEDLKFRFS PLIDEFVIDG
LRVGVEQAKE LNLVRKTFDV GPWFEPRFVD KAVEDLGLKS YWPRYDKSGQ PLGQ
|
|---|
| |