| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1447 |
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| Symbol | |
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| ID | 6409104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1529901 |
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| End bp | 1530590 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642711346 |
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| Product | urea ABC transporter, ATP-binding protein UrtE |
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| Protein accession | YP_001990462 |
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| Protein GI | 192289857 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | [TIGR03410] urea ABC transporter, ATP-binding protein UrtE |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.912027 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTCGCTA TCAACGATCT GCACGTCGCC TATGGACAGA GCGAGGTGTT GCACGGGCTC
AATATCGATG TCGCGCCGAA TGAGATCGTC GCGATCATGG GCCGCAACGG TATGGGCAAG
ACCACGCTGA TGAAGTCGCT GATGGGCATC ATCCCGCAGC GCAAAGGCTC GATCGCGATG
AACGGCATCG AGCTCGGCGG TCTCAAGAGC TACGAGCGCG TCGCCAAGGG ACTCGCTTAC
GTGCCACAGG GCCGGATGAT CTTCTCCACC ATGACGGTGA AGGAGAACAT CGAAACGGGA
CTTGCGGCCT CTGGCGACAG CGAGGTGCCG GCGGACATTT ACGAGCTGTT CCCGGTGCTG
CTCGAAATGA AAGGGCGGCG CGGCGGCAAT CTGTCCGGCG GCCAGCAGCA GCAACTCGCG
ATCGCCCGTG CGCTCGCCAC CAAGCCGAAG GTGCTGCTGC TCGACGAGCC GACCGAAGGC
ATCCAGCCGT CGATCATTCG CGAGATGGCG CGCACCTTGA AGCGCATCCG CGACAGCCGC
GGTCTTTCGA TCATCGTTTC CGAACAGGTG CTCAGCTTTG CGCTCGACGT CGCCGATCGG
GTGCTGGTGA TCGAAAACGG CGAAATCGTT CGCGATGAGC CGCGCGCCAG CGTCGATGAG
GCGCAGGTCG CGAAATATCT GTCCGTCTAG
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| Protein sequence | MLAINDLHVA YGQSEVLHGL NIDVAPNEIV AIMGRNGMGK TTLMKSLMGI IPQRKGSIAM
NGIELGGLKS YERVAKGLAY VPQGRMIFST MTVKENIETG LAASGDSEVP ADIYELFPVL
LEMKGRRGGN LSGGQQQQLA IARALATKPK VLLLDEPTEG IQPSIIREMA RTLKRIRDSR
GLSIIVSEQV LSFALDVADR VLVIENGEIV RDEPRASVDE AQVAKYLSV
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