Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1435 |
Symbol | |
ID | 6409092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 1515193 |
End bp | 1516704 |
Gene Length | 1512 bp |
Protein Length | 503 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642711334 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_001990450 |
Protein GI | 192289845 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.097494 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGGCGC TTCACGACTT CACGCTAGCC GACGTCTATC GCCGCAACGC GGCGCTGTTT CCCGATCGCA CGGCTTTCGT GGTCGATGGC GTCCGCCTCA CCCACCGCGA CTATCTGGCA CGGGCCGAGC GGCTGGCCAG CGGCCTGCTC CGCGACAGCG TGCACACCGG CGACCGGGTG GCGATTCTGT CGCAGAATTG CATCGAGATG ATCGAGCTGA TCGGCGCGGT GGCGTTGATC GGCGCGATCC TGCTGCCCGT GAACTATCGG CTCAACGCCG ACGAGATCGC CTTCGTGCTC GGCGACGGCG CCCCCAGCGT GGTGGTGGCC GGCACCGATT ATCGCGACAT CGTTGCCGGG GTGCTGCCTT CGCTCGGCGG CGTCAAGAAA GCCTACGCGA TCGGCGACGG TAGCGGACCG TTTGCGCCGT TCAAGGATCT CGCCTCGGAC ACGCCGTTCA GCGCCCCGGA GTTCGGCGCT GCCGACGGCT TCGTCATCAT CCACACCGCC GCGGTCGGCG GCCGGCCGCG CGGCGCGCTG ATCTCGCAGG GCAATCTCTT GATCGCGCAA AGCTCGCTGG TCGACGCATG GCGACTGACC GAAGCCGACG TCAATCTCGG CATGCTACCG CTGTTTCACG TCACCGGGCT CGGCCTGATG CTGACCCTGC AACAGGCCGG CGGTGCGAGT GTGATCGCCG CGAAGTTCGA CCCAGCGCAG GCCGCACGCG ACATCGAAGC TCACAAGGTG ACGGTGATGG CCGAGTTCGC GCCGATGCTC GGCAACATTC TCGATCAGGC CGAGCCGGCG CAGCTGGCCA GCCTGCGCGC CGTGACCGGG CTCGACACGC CGGAGACGAT CGAGCGGTTC GAGGCCACCT GCCCCAATGC GACGTTCTGG GCAACGTTCG GCCAATCAGA AACCTCGGGG CTCTCAACTT TTGCGCCCTA TCGTGACCGG CCGAAATCCG CCGGGCGCCC CCTGTTCTGG CGCACCGTCG CGGTGGTCGA TGCCGAAGAT CGCCCGCTGC CGCCGGGCGA AGTCGGCGAG ATCGTGCTGC GCGGCCCGAC CGTATTCAAA GGCTACTGGA ACAATGCGGC CGCCACCCAG CATGCGTTCC GCAATGGTTG GCACCATACC GGGGACATGG GCCGATTCGA TGCCGACGGC TATTTGTTCT ACGCCGGCCG CGCGCCCGAA AAGGAGCTGA TCAAGACCGG CGGCGAGAAC GTCTATCCGG CCGAGGTCGA AGGCGCACTG AAGCAGCATC CAGCGATCGC CGACGCGGTG GTGATCGGCG TGCCAGATCC GCAATGGAGC GAAGCGATCA AGGCGGTGTG CGTATGCAAA CCAGGCGAAA GCATCGCCGC CGACGCCCTC GCCGAATTCG TCGCATCGCT GATCGCGCGC TACAAGAAGC CAAAGCACGT GGTGTTCGTC GAGGAGCTGC CGAAGGATGC GAAGGGTGCT ATCGATCGGG CCGCAGTGAA GACAGCGCAC GGGCAGGCCT GA
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Protein sequence | MMALHDFTLA DVYRRNAALF PDRTAFVVDG VRLTHRDYLA RAERLASGLL RDSVHTGDRV AILSQNCIEM IELIGAVALI GAILLPVNYR LNADEIAFVL GDGAPSVVVA GTDYRDIVAG VLPSLGGVKK AYAIGDGSGP FAPFKDLASD TPFSAPEFGA ADGFVIIHTA AVGGRPRGAL ISQGNLLIAQ SSLVDAWRLT EADVNLGMLP LFHVTGLGLM LTLQQAGGAS VIAAKFDPAQ AARDIEAHKV TVMAEFAPML GNILDQAEPA QLASLRAVTG LDTPETIERF EATCPNATFW ATFGQSETSG LSTFAPYRDR PKSAGRPLFW RTVAVVDAED RPLPPGEVGE IVLRGPTVFK GYWNNAAATQ HAFRNGWHHT GDMGRFDADG YLFYAGRAPE KELIKTGGEN VYPAEVEGAL KQHPAIADAV VIGVPDPQWS EAIKAVCVCK PGESIAADAL AEFVASLIAR YKKPKHVVFV EELPKDAKGA IDRAAVKTAH GQA
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