Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1421 |
Symbol | |
ID | 6409078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 1500762 |
End bp | 1501322 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642711320 |
Product | pyruvate ferredoxin/flavodoxin oxidoreductase |
Protein accession | YP_001990436 |
Protein GI | 192289831 |
COG category | [C] Energy production and conversion |
COG ID | [COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.339025 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCGACAT CCCGCATCGA ACTGCGCTTC GGCGGTACCG GCGGCCAGGG CCTGTTGCTC AGCGCCAAGC TGCTGGCCGA CGCGCTGGCG CTGGAAGGCC GTCACGTCGC GCAGTCGCAG ACCTACGAGC CGACCTCGCG CGGCGGTTTC TGTAACGCCG ACCTCGTCGT CGCTCATGGT GAGGTCGACT ATCCGCTGCC GATTGAGTTC GACCATCTGG TGCTGCTCGA CAAAATCGCC ATCAAGCCGT CCTGGCCGAA GCTTAAGGCC GGCGCGCTGG TGATCTCCGA CGTCCGGCTG TGCCCGGAAC TGCCGGAAGG CGGACGGTTC AAGCGCTATC CGTTGCCGCT TAGCCGCACC GCGATCGAAC TCGGCAGCGA ACGCGTCACC AACATCGTCG CGCTCGGCGT GCTGATCGAG CTGTCCGGCA TCTGCAAGCA CAAGTCGGTC GAGCAGGTGG TGCGTGCGTC GTCGCCGCGC GGCTTCCTTG ACCTCAACAT GGATGCGCTG GCCGCCGGCT ACGCGCTGGC CAAGACGCCT GCCGTCGCGG CGGCCTCCTG A
|
Protein sequence | MSTSRIELRF GGTGGQGLLL SAKLLADALA LEGRHVAQSQ TYEPTSRGGF CNADLVVAHG EVDYPLPIEF DHLVLLDKIA IKPSWPKLKA GALVISDVRL CPELPEGGRF KRYPLPLSRT AIELGSERVT NIVALGVLIE LSGICKHKSV EQVVRASSPR GFLDLNMDAL AAGYALAKTP AVAAAS
|
| |