Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1410 |
Symbol | |
ID | 6409067 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 1487818 |
End bp | 1488948 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642711309 |
Product | carboxypeptidase |
Protein accession | YP_001990425 |
Protein GI | 192289820 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.212173 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCCAG CAAATCTCCC ATTCGATTCC GATACGATGC TGCAAGGCCT GCGCGCCTGG GTTGAATGTG AGAGCCCGAC CTGGGACACC GCCGCGGTGG AGCGCATGCT CGATCTTGCA GCGCGGGAGA TGGCGATCAT GGGCGCGACA ATCGAGCGCA TCGCCGGCCG CCAGGGTTTC GCCGGTTGTG TCCGCGCGCG CTTTCCGCAT CCCAAGCAAG GCGAGCCCGG CATCCTGATC GCCGGTCATC TCGACACCGT GCATCCGGTC GGCACGCTGT CGAAGCTGCC GTTCCGCCGC GAGGGCAACA AGGCGTTCGG CCCCGGCATC TTCGACATGA AGGGCGGTAA CTACCTGACG CTGGAAGCGA TCAAGCAGCT CGCGCGCGCG TCGTTCACGA CGCCGCTGCC GATCACGGTG CTGTTCACGC CCGACGAAGA AGTCGGGACG CCGTCGACCC GTGACATCAT CGAAGCCGAA GCGGCGCGCA ACAAATACGT GCTGGTGCCG GAGCCCGGCC GCCCAGACAA CGGCGTCGTC ACCGGCCGCT ACGCGATCGC GCGATTCAAC CTGGAGGCGA TCGGCAAACC GAGCCACGCC GGCGCGACGT TGTCGTCAGG CCGTTCCGCG ATACGGGAAA TGGCCAAGCA GATTCTGGCG ATCGATGCGA TGACCACGGA AGACTGCACC TTCAGCGTCG GCATCGTCCA CGGCGGCCAA TGGGTGAATT GCGTCGCCAC CACCTGCACC GGCGAAGCGC TCAGCATGGC CAAGCGCCAG GCAGACCTCG ACCGCGGCGT CGACCGCATG CTGGCGCTGA GCGGCAGCAG CAGTGACGTC ACCTTCAAGG TGACGCGCGG CGTCACCCGC CCGGTGTGGG AGCCGGATGC CGGCACCATG GCGCTTTACG AAAAGGCCCG CGCGGTCGCG TCCCAGCTCG GTGTCAGCCT GCCGCACGGC AGCGCCGGCG GCGGCTCCGA CGGCAACTTC ACCGGCGCGA TGGGCATTCC GACGCTTGAT GGCCTCGGTG TGCGCGGCGC AGACGCGCAC ACGCTGAACG AGCACATCGA GGTCGACAGC CTCGCCGAGC GCGGTCGGCT GATGGCGGGC CTGCTCGCAA CGCTGGAGTG A
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Protein sequence | MNPANLPFDS DTMLQGLRAW VECESPTWDT AAVERMLDLA AREMAIMGAT IERIAGRQGF AGCVRARFPH PKQGEPGILI AGHLDTVHPV GTLSKLPFRR EGNKAFGPGI FDMKGGNYLT LEAIKQLARA SFTTPLPITV LFTPDEEVGT PSTRDIIEAE AARNKYVLVP EPGRPDNGVV TGRYAIARFN LEAIGKPSHA GATLSSGRSA IREMAKQILA IDAMTTEDCT FSVGIVHGGQ WVNCVATTCT GEALSMAKRQ ADLDRGVDRM LALSGSSSDV TFKVTRGVTR PVWEPDAGTM ALYEKARAVA SQLGVSLPHG SAGGGSDGNF TGAMGIPTLD GLGVRGADAH TLNEHIEVDS LAERGRLMAG LLATLE
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