| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1398 |
|---|
| Symbol | |
|---|
| ID | 6409055 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 1470990 |
|---|
| End bp | 1472141 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642711297 |
|---|
| Product | iron-containing alcohol dehydrogenase |
|---|
| Protein accession | YP_001990413 |
|---|
| Protein GI | 192289808 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1454] Alcohol dehydrogenase, class IV |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.145523 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCAA CGACCTTCTT CATTCCCTCT CTCAATCTGT TCGGCGCCGG CTGCGTATCG
AGCGCAGCGG ACCACGCCAA GGCACGCGGC TTCAAGCGCG CGCTGATCGT CACCGACAGC
GGGCTGCACA AGCTCGGCGT CGCCGATCAG ATCGCCTCGA TGCTGATCGA GCGCAACGTG
ACCAGCGTCG TCTTCCCGGG CGCGAAGCCA AACCCGACGA TCAAGAACGT CGAGGACGGG
CTTGCACTGC TGAAGCAGGA ACACTGCGAC TGTGTGATCT CGCTCGGCGG CGGTTCAGCG
CACGACTGCG CGAAGGGCAT CGCGCTGACC GCCACCAATG GCGGCAGCAT CAAGGACTAT
GAAGGCGTCG ATCGGTCGGC GCACGCTCAG CTTCCGCTGA TCGCCATCAA CACCACGGCC
GGTACGGCGA GTGAGATGAC GCGGTTCTGC ATCATCACCG ACGAGGAACG CCAGGTGAAG
ATGGCGATCG TCGACCGCCA CACCACGCCG CTGCTGTCGG TCAACGATCC GGTACTGATG
CTCGGCAAGC CGCCGGCCCT CACCGCCGCG ACCGGCATGG ACGCGCTGAC GCACGCGATC
GAAGCCTATG TGTCGATTGC CGCAACGCCG ATCACTGACG CCTGCGCGCT GAAGGCGATG
TCGATCATCT CCAACAGTCT GCGCACCGTG GTCGCCGAGG GCCAGAACCT CGTCGCCCGC
GAGGCGATGT CGTATGCGGG CTTCCTCGCC GGCATGGCGT TCAACAATGC CTCGCTCGGC
TATGTACATG CGATGGCGCA CCAGCTCGGC GGCTTCTACG ACCTGCCGCA CGGCGTCTGC
AACGCGGTGC TGCTGCCGCA CGTGCAGGCC TACAACGCGC AAGTCGCGGC GGGACGGCTG
AAGGACGTCG CACACGCGCT CGGCGTCGAC ACCACCGGCA TGACCGATGC CCAGGGCGCC
GATGCCGCCA TTCATGCCAT CCAGCGGCTA TCGGCCGATG TCGGCATTCC GCCCGGTCTC
GGCGGTCTCG GCATGAAGGA AACCGACGTG CCGATCCTCG CCGCCAACGC GCTGAAGGAT
GCGTGCGGCT TCACCAATCC GAAGCAGGCG ACGCAGACCG AGATCGAAAC CATCTTCCGG
GCGGCCGCCT GA
|
|---|
| Protein sequence | MTATTFFIPS LNLFGAGCVS SAADHAKARG FKRALIVTDS GLHKLGVADQ IASMLIERNV
TSVVFPGAKP NPTIKNVEDG LALLKQEHCD CVISLGGGSA HDCAKGIALT ATNGGSIKDY
EGVDRSAHAQ LPLIAINTTA GTASEMTRFC IITDEERQVK MAIVDRHTTP LLSVNDPVLM
LGKPPALTAA TGMDALTHAI EAYVSIAATP ITDACALKAM SIISNSLRTV VAEGQNLVAR
EAMSYAGFLA GMAFNNASLG YVHAMAHQLG GFYDLPHGVC NAVLLPHVQA YNAQVAAGRL
KDVAHALGVD TTGMTDAQGA DAAIHAIQRL SADVGIPPGL GGLGMKETDV PILAANALKD
ACGFTNPKQA TQTEIETIFR AAA
|
|---|
| |