Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1363 |
Symbol | |
ID | 6409020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 1436316 |
End bp | 1436939 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642711262 |
Product | putative outer-membrane immunogenic protein precursor |
Protein accession | YP_001990378 |
Protein GI | 192289773 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3637] Opacity protein and related surface antigens |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.76499 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTAAAG TTACACTGGC AGCGGCGGCC GTGATCGCCG CAAGCGTGTC GACGGCTCAG GCGGCCGACA TGGGTTACTA CCGGTCGAAC GCGCCCTATA CGGTCAATCA GCCGCTCAAC GCCTTCAGCT GGGCCGGCCC CTATCTCGGC GGCAACCTCG GCTACTCCTG GGGCAACGTC ACCAACAACA TCACCAAGCC GTCGGGCTTC TCCGGCGGCG TGCAGGGCGG CTACAACTGG CAGTCCGGCA ACATCGTGTT CGGTCTCGAG GGCGACATTC AGTTCTCGAC CGCCGACGAC ACCTTCGCGC AGTACAAGTT CTCGAACCCA TGGTTCGGCA CCGGCCGCGG CCGCATCGGC TACGCGATGA ACGACGTGCT GATCTACGCC ACCGGCGGTC TGGCGTTCGG CCAGCTCAAG GGCCAGAACG TGTTCGCCTC GGAAAGCCAC AGCTCTGCGG GCTGGACGGT CGGCGCCGGT GCCGAGTTCG CCTTCGCTCC GAAGCTGAGC GCCAAGGTCG AGTATTTGTA TATGAGCCTG TCGACCAGCA ATTTCTTCAT CACTGGCATG CCGAACGGCT ACAACGCCGG GTTGGTCCGC GCCGGCATCA ACTATCACTT CTAA
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Protein sequence | MRKVTLAAAA VIAASVSTAQ AADMGYYRSN APYTVNQPLN AFSWAGPYLG GNLGYSWGNV TNNITKPSGF SGGVQGGYNW QSGNIVFGLE GDIQFSTADD TFAQYKFSNP WFGTGRGRIG YAMNDVLIYA TGGLAFGQLK GQNVFASESH SSAGWTVGAG AEFAFAPKLS AKVEYLYMSL STSNFFITGM PNGYNAGLVR AGINYHF
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