| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1354 |
|---|
| Symbol | |
|---|
| ID | 6409011 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | + |
|---|
| Start bp | 1426638 |
|---|
| End bp | 1427546 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642711253 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_001990369 |
|---|
| Protein GI | 192289764 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.420067 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGATC TCGCCGACTT GTTTCCGGGC TTCGGCTCGG AATGGATCAA CACCTCTTCG
GGCCGGATCT TCGCGCGCGT CGGCGGTGAC GGACCGCCGC TATTGTTGCT GCACGGCTTT
CCGCAGACCC ATGTGATGTG GCACCGCGTC GCGCCGAAGC TCGCCGAGCG CTTCAAGGTG
GTCGTCGCCG ATCTGCCCGG TTACGGGTGG TCGGATATGC CGGAGAGCGA CGAGCAGCAC
ACGCCCTACA CCAAGCGGGC GATGGCCAAG CAACTGATCG AGGCGATGGA GCAGCTCGGC
CACGTGCACT TTGCGCTCGC CGGCCATGAT CGTGGTGCGC GCGTCAGCTA TCGGCTGGCG
CTGGATTCGC CAGGCCGGCT GTCGAAGCTC GCGGTGCTCG ATATCCTGCC GACCTACGAA
TACTGGCAGC GGATGAACCG CGCCTATGCG CTCAAGATCT ATCACTGGAG CTTCCTGGCG
CAGCCGGCTC CGCTGCCGGA AAATCTGCTC GGCGGCGATC CTGATTTCTA CGTCAAAGCC
AAGCTGGCGA GCTGGACGCG GGCAGGCGAC CTGTCGGCGT TCGATCCGCG TGCCGTCGAG
CATTATCGTC TTGCATTCGC CGACCCGATG CGCCGCCACG TGATGTGCGA GGACTATCGC
GCCGGCGCCT ATGCGGATTT CGAGCACGAC AAGATCGATG TCGAAGCCGG CAACAAGATC
CCGGTGCCGA TGCTGGCGCT GTGGGGCGCC TCCGGCATCG CACAGTCGGC CGCGACGCCG
CTCGATGTCT GGCGAAAGTG GGCGTCCGAC GTGCAGGGCG CGCCGATCGA GTCCGGGCAT
TTCCTTCCCG AGGAAGCGCC GGATCAGACC GCCGAGGCGC TGGTAAGGTT CTTCAGCGCC
GCGCCTTGA
|
|---|
| Protein sequence | MPDLADLFPG FGSEWINTSS GRIFARVGGD GPPLLLLHGF PQTHVMWHRV APKLAERFKV
VVADLPGYGW SDMPESDEQH TPYTKRAMAK QLIEAMEQLG HVHFALAGHD RGARVSYRLA
LDSPGRLSKL AVLDILPTYE YWQRMNRAYA LKIYHWSFLA QPAPLPENLL GGDPDFYVKA
KLASWTRAGD LSAFDPRAVE HYRLAFADPM RRHVMCEDYR AGAYADFEHD KIDVEAGNKI
PVPMLALWGA SGIAQSAATP LDVWRKWASD VQGAPIESGH FLPEEAPDQT AEALVRFFSA
AP
|
|---|
| |